Gene Information

Name : ytrE (BAM5036_2674)
Accession : YP_007498356.1
Strain : Bacillus amyloliquefaciens UCMB5036
Genome accession: NC_020410
Putative virulence/resistance : Resistance
Product : ABC transporter (ATP-binding protein)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2862003 - 2862707 bp
Length : 705 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10986249; Product type t : transporter

DNA sequence :
GTGGTGTACGTGATAGAGGTACAGCATATCGATCATTCATTTAAAATCGGCAGGAAAGGCAGAGAGAGTGAGGTTCCGGT
GCTGAAGGATGTCTCTTTGACCGTTGAAAAAGGGGAAATTGCCTGTATCGTCGGGCGGAGCGGTTCCGGAAAATCAACGC
TTCTGAATTTAATTTCGGGATACATAGCGCCGACAAAGGGCCGTATCGTCATTAACGGCACTGATGTGACGGGTTTCAAT
GAAAAAGAGTGGGCGCAGTTCCGCCTCGGGCATTTCGGCTTTATTTTTCAAAGCTTTCAGCTCATTCCGAGTCTGACAAC
CTATGAAAATGTTGAAATGCCGCTTGCCTTAAAAGGCGTCAAACCGTCTGAACGCAAGCAGAAAGTCGCGGATATGCTGA
AACGGGTCGGACTTGAGAATCATGCGAATCATTATCCGAATGAGCTGTCAGGCGGCCAGCAACAGCGTGTCAGTATCGCA
AGAGCCCTCATTTTAAATCCGTCAATTATTTTAGCCGATGAGCCGACGGGAAGCCTCGATTCAGAAACGGAACTTGAGGT
GCTTGCATTAATTCAGCAGCTGAACCGGGAGCGCGGGATTACATTTGTCATCATTACGCATGACGATGAAGTCGCTTCGA
TCGCGCATTCAAAATTCCAGCTGCATGACGGTGTATTAAAAGGGGGCGTTACTGTTGAGATTTAA

Protein sequence :
MVYVIEVQHIDHSFKIGRKGRESEVPVLKDVSLTVEKGEIACIVGRSGSGKSTLLNLISGYIAPTKGRIVINGTDVTGFN
EKEWAQFRLGHFGFIFQSFQLIPSLTTYENVEMPLALKGVKPSERKQKVADMLKRVGLENHANHYPNELSGGQQQRVSIA
RALILNPSIILADEPTGSLDSETELEVLALIQQLNRERGITFVIITHDDEVASIAHSKFQLHDGVLKGGVTVEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-32 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ytrE YP_007498356.1 ABC transporter (ATP-binding protein) NC_008702.1.4606598. Protein 7e-42 47
ytrE YP_007498356.1 ABC transporter (ATP-binding protein) CP001581.1.gene598.p Protein 2e-38 45
ytrE YP_007498356.1 ABC transporter (ATP-binding protein) NC_012469.1.7686878. Protein 6e-41 44
ytrE YP_007498356.1 ABC transporter (ATP-binding protein) CP001581.1.gene798.p Protein 1e-36 43
ytrE YP_007498356.1 ABC transporter (ATP-binding protein) NC_012469.1.7686946. Protein 6e-23 41