Gene Information

Name : yocR (BAM5036_1840)
Accession : YP_007497541.1
Strain : Bacillus amyloliquefaciens UCMB5036
Genome accession: NC_020410
Putative virulence/resistance : Unknown
Product : putative sodium-dependent transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2023256 - 2024593 bp
Length : 1338 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 15849754, 16850406; Product type pt : putative transporter

DNA sequence :
GTGAAAGAAGCTAATCAATGGTCATCTAAGCTGGGATTTATTTTAGCTACGGCCGGCTCTGCAATCGGGCTCGGCGCAAT
ATGGAAGTTCCCTTACGTAGCGGGAACCAGCGGAGGCGGCGCTTTTCTGCTTGTTTTTATTTTATTTACTGTATTAATCG
GACTGCCGCTTTTGCTTGCTGAATTTATTATCGGCAGAAAAACACAAAAAAACGCCGTTGAATCCTATAAGGCGCTCGCG
CCGGGGAAAAAGTGGCACTGGATCGGATATCTCGGAATCATTACGTGTTTTATTCTATTATCCTTCTACAGCGTAGTGGG
GGGATGGATATTAATCTACATTATAAAAGGCTTTACAGGCGGCTTATCGCTTTCTTCGGGATTTGATACGTTATTTATCG
ATACCATTTCAAATCCTTATGCAGCCGTTTTCGGCCAGCTGCTGTTTATCGTGCTGACGATTTTAGTTGTGGCAAAAGGG
GTGAGCAGCGGCATTGAAAAAGTGAGCCAGGTGCTGATGCCGGCTCTGTTTATTCTGTTTATTCTCTTAATGATCCGCTC
CGTAACACTGCATGATGCAGCAAAAGGATTAAAATTCTTTTTTATGCCTGATTTTGGCGCGATGGATGCCAATACCATTT
TATATGCGATGGGACAATCATTTTTCTCGTTAAGCGTCGGAGTGTCCGTAATGGTTACATACAGCGCATATTTAGAAAAA
GAAGAAAATATTGTTCAATCCGCCGTATCGGTGACGGTATTAAATGTCCTTGTTGCTGTGATGGCGGGAGTGGCGATTTT
TCCGGCGGTGTTTGCATTCGGCCTCAAGCCGGATCAAGGCCCGCAGCTTTTATTTAACGTGCTGCCGACCGTCTTTAACC
AAATGCCGTTGGGCATCGTGTTTTTACTCGCCTTTTTGCTGCTGTTTTTATTTGCGACGCTGACATCGGCTTTTTCAATG
CTTGAAATTTTAGTTGCTGTTTTGTCAAAAGGCGATTCGGCAAAACGGAAGCGGTATGCATGGATCGGGGGACTTGCTAT
ATTTATTGTCGGGGTCCCTTCGGCGCTGTCGTACGGAATTTTGAGTGATGTTTCTATTTTTCACCGCAGTATTTTTGACG
CTGCGGATTTTCTGGTCAGCAATGTCTTAATGCCGCTGGGCGCGCTTTTAATTGCCGTTTTCGTACCGTTGAAAATCCCG
AAACAGATGCTGTTTGACGAACTGAAAAGCGGTTCCGGTATAAAACGAAAATGGTTTGCAGTCTGGCTCCTATTAATCCG
TTATGTGGCTCCTGTTGCCATTATTATCGTTTTTCTGCATGTGCTTGGTATTTTTTAA

Protein sequence :
MKEANQWSSKLGFILATAGSAIGLGAIWKFPYVAGTSGGGAFLLVFILFTVLIGLPLLLAEFIIGRKTQKNAVESYKALA
PGKKWHWIGYLGIITCFILLSFYSVVGGWILIYIIKGFTGGLSLSSGFDTLFIDTISNPYAAVFGQLLFIVLTILVVAKG
VSSGIEKVSQVLMPALFILFILLMIRSVTLHDAAKGLKFFFMPDFGAMDANTILYAMGQSFFSLSVGVSVMVTYSAYLEK
EENIVQSAVSVTVLNVLVAVMAGVAIFPAVFAFGLKPDQGPQLLFNVLPTVFNQMPLGIVFLLAFLLLFLFATLTSAFSM
LEILVAVLSKGDSAKRKRYAWIGGLAIFIVGVPSALSYGILSDVSIFHRSIFDAADFLVSNVLMPLGALLIAVFVPLKIP
KQMLFDELKSGSGIKRKWFAVWLLLIRYVAPVAIIIVFLHVLGIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0458 YP_039907.1 sodium:neurotransmitter symporter family protein Not tested vSa¥á Protein 9e-70 48
SAS0416 YP_042543.1 sodium:neurotransmitter symporter family protein Not tested vSa¥á Protein 9e-70 48