Gene Information

Name : dhaS (BAM5036_1837)
Accession : YP_007497538.1
Strain : Bacillus amyloliquefaciens UCMB5036
Genome accession: NC_020410
Putative virulence/resistance : Virulence
Product : putative aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.8
Position : 2018908 - 2020395 bp
Length : 1488 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type pe : putative enzyme

DNA sequence :
ATGAGTTCTTTAACGATGCAGATCACAAAAAGGCTGGAAACATTTTTACAGGGCACGAAGAAACTTTATATTGACGGAAA
ATTTGTTCCGAGCGCTTCAGGATCAACATTTGTCACACCGAATCCGGCAACCGGAGAAACGCTGATGACGCTTTACGAGG
CACAGACAGAAGACATTGACAGTGCAGTGAAAGCGGCACGCAAAGCCTTTGATCACGGCGAATGGCGCACTATGCCGGCC
GCTTCCAGAAGCAGGCTGATGTATAAGCTTGCCGATTTAATGGAAGAGCACAAAACGGAACTCGCGCAGCTTGAAACACT
TGATAACGGAAAACCGATTAATGAAACGACGAATGGGGATATCCCGCTCGCAATTGAGCATATGCGTTATTATGCCGGGT
GGTCTACAAAGATAACCGGACAAACGATTCCGGTCGCCGGCTCATATTTTAATTACACCCGCCATGAGCCTGTCGGCGTC
GTGGGGCAGATCATCCCTTGGAACTTCCCGCTCCTTATGGCGATGTGGAAAATGGGCGCCGCCCTTGCCACAGGCTGCAC
AATCGTTTTGAAACCGGCCGAGCAGACACCGCTGACCGCCCTCTATTTAGCGGAATTAATAGATCAGGCGGGCTTCCCTG
ACGGCGTCATCAATATTGTCCCAGGGTTCGGCGAGACGGCCGGGGAAGCGCTGACCAACCATGACGATGTCGATAAACTC
GCTTTTACCGGCTCTACAGAAATCGGCAAAAAAATCATGGAAAAAGCCGCAAAAAAAATTAAACGCGTGACACTGGAGCT
TGGCGGAAAGTCACCTAACATCATTTTGCCTGACGCCAATTTGAAGAAAGCGATTCCCGGCGCTTTAAACGGGGTCATGT
TTAATCAGGGGCAGGTATGCTGCGCAGGCTCCCGCGTCTTCATTCACAAAGACAAATATGATGAGGTCGTCAGCGAAATG
GTTTCATATGCGAAATCGCTTCAGCAAGGCGCCGGCCTTCACCAAGATACACAAATCGGCCCGCTCGTCAGTCAGGAACA
GCATGAGCGCGTGCTTTCATATATTGAAAAAGGAAAAGCGGAAGGAGCCAAAGCTGTCGCGGGCGGCAGCTGCCCGTTTG
AAGAAGGGTATTTTGTCTCCCCGACTGTATTTGCGGATGTGGATGACAGCATGACCATCGCAAAAGAAGAAATTTTCGGC
CCTGTTTTAGCAGCCATTCCGTATGATACGGTAGATGAAGTCATTGAGAGGGCGAACCGCTCGGAATACGGCCTTGCAGC
CGGACTTTGGACTGAGAATGTGAAAAACGCCCATTACATTGCTGACCGTCTCCAAGCCGGCACCATTTGGGTCAACTGCT
ACAATGTTTTCGATGCGGCATCTCCTTTCGGCGGCTATAAGCAATCCGGCCTCGGGCGGGAAATGGGCTCTTACGCGCTG
GATAATTATACAGAAGTGAAAAGCGTCTGGATCAATCTGGAAGATTAA

Protein sequence :
MSSLTMQITKRLETFLQGTKKLYIDGKFVPSASGSTFVTPNPATGETLMTLYEAQTEDIDSAVKAARKAFDHGEWRTMPA
ASRSRLMYKLADLMEEHKTELAQLETLDNGKPINETTNGDIPLAIEHMRYYAGWSTKITGQTIPVAGSYFNYTRHEPVGV
VGQIIPWNFPLLMAMWKMGAALATGCTIVLKPAEQTPLTALYLAELIDQAGFPDGVINIVPGFGETAGEALTNHDDVDKL
AFTGSTEIGKKIMEKAAKKIKRVTLELGGKSPNIILPDANLKKAIPGALNGVMFNQGQVCCAGSRVFIHKDKYDEVVSEM
VSYAKSLQQGAGLHQDTQIGPLVSQEQHERVLSYIEKGKAEGAKAVAGGSCPFEEGYFVSPTVFADVDDSMTIAKEEIFG
PVLAAIPYDTVDEVIERANRSEYGLAAGLWTENVKNAHYIADRLQAGTIWVNCYNVFDAASPFGGYKQSGLGREMGSYAL
DNYTEVKSVWINLED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-86 47
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-82 44
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-83 44
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-83 44
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-83 44
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-83 44
hpaE AAO17179.1 HpaE Not tested tcd island Protein 4e-70 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
dhaS YP_007497538.1 putative aldehyde dehydrogenase VFG0082 Protein 2e-82 44