Gene Information

Name : xylA (BAM5036_1681)
Accession : YP_007497386.1
Strain : Bacillus amyloliquefaciens UCMB5036
Genome accession: NC_020410
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : -
COG ID : -
EC number : 5.3.1.5
Position : 1798834 - 1800171 bp
Length : 1338 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7663444, 8132469; Product type e : enzyme

DNA sequence :
ATGGCTCACTCTCATTCCGGTTCGGTCAACTATTTTGAAAGCGTAAACAAAGTGATTTACGAAGGGAAAGAATCCACGAA
TCCTTTAGCATTTAAATACTATAATTCTCAAGAAGTAATTGGCGGAAAAACGATGAAAGAGCATTTGCGATTTTCTATTG
CCTATTGGCATACATTTACCGCTGACGGCACAGACATGTTTGGAGCAGCTACGATGCAAAGACCGTGGGATCATTATAAA
GGCATGGATCTGGCGAGAGCGAGGGTAGATGCAGCGTTTGAGCTGTTTGAAAAACTGGATGCGCCATTTTTTGCTTTTCA
TGACCGGGATATCGCACCGGAAGGAAGTACGTTAAAAGAGACAAATCAAAATCTGGATATAATCGTGGACATGATAAAAG
ACTACATGAGAACCAGCGGCGTTAAGCTATTATGGAATACTGCAAACATGTTTACGAATCCCCGTTTCGTCCATGGTGCG
GCGACTTCTTGTAATGCAGATGTATTTGCGTATGCCGCAGCCCAAGTAAAAAAAGGATTAGAAACAGCAAAGGAGCTTGG
CGCCGAGAACTATGTATTTTGGGGCGGACGTGAAGGGTACGAAACTTTGTTAAATACCGATTTAAAATTTGAGCTTGATA
ATATGGCCAGATTTATGCATATGGCAGTGGATTATGCGAAGGAAATCGGGTATACAGGGCAGTTTTTGATTGAACCAAAA
CCAAAAGAGCCGACCACCCATCAATATGATACGGACGCAGCAACAACCATTGCCTTTTTAAAGCAATATGGCTTAGACAA
TCATTTTAAATTAAATCTCGAAGCCAATCATGCCACATTAGCCGGACATACATTCGAACATGAATTACGAATGGCGAGAG
TGCATGGCTTGCTTGGCTCTGTTGACGCGAATCAGGGTGATCCGCTTTTAGGCTGGGACACAGATGAATTTCCGACAGAT
TTATATTCTGCGACATTAGCAATGTACGAAATTCTGCAAAATGGCGGTCTTGGAAGCGGAGGATTAAACTTTGACGCAAA
GGTCAGGAGATCTTCTTTTGAGCCTGATGATTTACTATATGCCCATGTTGCAGGGATGGATACATTTGCGAGAGGGTTGA
AAGCCGCCCACAAATTAATCGAAGATCGTGTGTTTGAAGATGTGATTCAACACCGTTACCGCAGCTTTACTGAAGGGATT
GGTCTTGAAATTGCAGAAGGAAGAGCTGATTTTAAAACACTTGAGCAATATGCGCTGAACAATCAGCCAATTAAAAACGA
ATCAGGGAGACAGGAGCGGGTAAAAGCGATATTAAATCAATACATTTTACAGGTATAA

Protein sequence :
MAHSHSGSVNYFESVNKVIYEGKESTNPLAFKYYNSQEVIGGKTMKEHLRFSIAYWHTFTADGTDMFGAATMQRPWDHYK
GMDLARARVDAAFELFEKLDAPFFAFHDRDIAPEGSTLKETNQNLDIIVDMIKDYMRTSGVKLLWNTANMFTNPRFVHGA
ATSCNADVFAYAAAQVKKGLETAKELGAENYVFWGGREGYETLLNTDLKFELDNMARFMHMAVDYAKEIGYTGQFLIEPK
PKEPTTHQYDTDAATTIAFLKQYGLDNHFKLNLEANHATLAGHTFEHELRMARVHGLLGSVDANQGDPLLGWDTDEFPTD
LYSATLAMYEILQNGGLGSGGLNFDAKVRRSSFEPDDLLYAHVAGMDTFARGLKAAHKLIEDRVFEDVIQHRYRSFTEGI
GLEIAEGRADFKTLEQYALNNQPIKNESGRQERVKAILNQYILQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 4e-127 64
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 3e-127 64