Gene Information

Name : nrdE (BAM5036_1662)
Accession : YP_007497369.1
Strain : Bacillus amyloliquefaciens UCMB5036
Genome accession: NC_020410
Putative virulence/resistance : Unknown
Product : Ribonucleotide reductase of class Ib (aerobic),alpha subunit
Function : -
COG functional category : -
COG ID : -
EC number : 1.17.4.1
Position : 1778105 - 1780159 bp
Length : 2055 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8969495; Product type e : enzyme

DNA sequence :
ATGATCCAACAAGATGGAAAATTCCAGTTTGATAAAGATAAAGAGGCTGTACATAGCTATTTTGTTGACTATATCAATCA
AAACACAGTTTACTTTCACGATTTAAAAGAGAAGCTGGATTATTTGATTGAAAACCAATACTACGAAGAGGAATTCTTAA
GCCTTTACTCTTTTGAAGACATTAAAGAAGTGTTTAAGACAGCTTACGCAAAGAAGTTTCGTTTTCCTTCCTTCATGAGT
GCGTTTAAATTTTATAATGACTATGCTTTGAAAACGAATGACAAGAAAAGAATCCTCGAGCGTTATGAGGACCGAATCTC
AATCGTCGCGCTGTTCTTCGCAAACGGCGACACTGAGAAAGCAAAAGAATATGTAAACCTGATGATCAACCAGGAATATC
AGCCGAGTACACCGACATTTTTGAATGCCGGCAGAAAACGCCGCGGAGAACTGGTGAGCTGCTTCTTGCTCGAAGTCAAT
GATTCCTTAAACGATATTTCACGGGCGATCGATATTTCCATGCAGCTGTCTAAATTGGGCGGCGGGGTTTCTCTTAATCT
GTCCAAGCTTCGCGCGAAAGGCGAAGCGATTAAAGATGTTGAAAACGCCACAAAAGGCGTTGTAGGCGTCATGAAGCTTC
TTGATAATGCGTTCCGTTACGCTGACCAAATGGGCCAAAGACAAGGCTCGGGCGCGGCGTATTTAAATATTTTCCACCGC
GATATCAATGATTTTCTTGATACGAAAAAGATTTCTGCGGATGAAGATGTGCGCGTCAAAACGCTTTCTATCGGTGTCGT
CATTCCGGATAAGTTCGTTGAGCTTGCACGTGAGGATAAAGCGGCTTATGTATTCTATCCGCATACGATTTATAAAGAAT
ACGGCCAGCATATGGACGAAATGGACATGACGGCGATGTATGAGGAGCTTGTCGACAACCCGCGTGTCAAAAAAGAAAAA
GTGAATGCGCGCAAATTGCTTGAAAAGCTTGCCGTTCTCCGTTCCGAGTCAGGTTATCCGTACATTATGTTCCAGGACAA
CGTAAACAAAGAGCACGCGAATAACCACGTATCAAAAGTGAAATTCTCGAACCTTTGCTCTGAAGTGCTTCAGGCGTCAC
AGGTTTCGGCTTACACAGATTATGACGAGGAAGACGAAATCGGCTTGGACATTTCCTGCAACCTTGGTTCATTAAATATT
TTGAATGTCATGAAACATAAATCGATTGAGCGCACGGTGAAACTCGCGACGGATTCCCTGACTCATGTATCTGAGACGAC
GGATATCCGCAACGCGCCGGCAGTCAGACGCGCGAACAAAGCGATGAAGTCGATCGGTTTAGGCGCCATGAACCTTCACG
GCTACCTGGCCCAAAACGGCATCGCGTATGAAAGCCCGGAAGCAAGAGATTTCGCGAATACGTTCTTTATGATGGTGAAC
TTTTATTCCATTCAGCGTTCAGCTGAGCTTGCGAAAGAAAAAGGCGAAACGTTTGAGCATTATGAAGGCTCCACTTATGC
AACGGGAGAATATTTCAATAAATACATCGAAAAAGAGTTCTCACCGGCATACGAAAAAATCGCTGCGCTCTTTGAAGGCA
TGCACATTCCGACAATCGAAGACTGGAAAGAGCTGAAGGCGTTTGTCGCTGAAAACGGCATGTACCACAGCTACAGACTG
TGCATCGCACCGACAGGTTCCATTTCCTATGTCCAATCCAGCACGGCGTCCGTTATGCCGATCATGGAACGGATCGAAGA
AAGAACATATGGAAATTCAAAAACGTATTACCCGATGCCGGGGTTAGCTTCTAATAACTGGTTCTTCTACAAAGAAGCTT
ATGATATGGACATGTTCAAAGTGGTGGATATGATCGCGACAATCCAGCAGCATATCGATCAGGGAATCAGCTTTACCCTA
TTTTTGAAAGATACGATGACAACTCGTGATCTGAACCGTATTGATTTGTATGCCCACCATAGAGGCATCAAAACCATTTA
CTATGCAAGAACGAAAGATACCGGGCAGGACAGCTGTCTTTCTTGTGTCGTTTGA

Protein sequence :
MIQQDGKFQFDKDKEAVHSYFVDYINQNTVYFHDLKEKLDYLIENQYYEEEFLSLYSFEDIKEVFKTAYAKKFRFPSFMS
AFKFYNDYALKTNDKKRILERYEDRISIVALFFANGDTEKAKEYVNLMINQEYQPSTPTFLNAGRKRRGELVSCFLLEVN
DSLNDISRAIDISMQLSKLGGGVSLNLSKLRAKGEAIKDVENATKGVVGVMKLLDNAFRYADQMGQRQGSGAAYLNIFHR
DINDFLDTKKISADEDVRVKTLSIGVVIPDKFVELAREDKAAYVFYPHTIYKEYGQHMDEMDMTAMYEELVDNPRVKKEK
VNARKLLEKLAVLRSESGYPYIMFQDNVNKEHANNHVSKVKFSNLCSEVLQASQVSAYTDYDEEDEIGLDISCNLGSLNI
LNVMKHKSIERTVKLATDSLTHVSETTDIRNAPAVRRANKAMKSIGLGAMNLHGYLAQNGIAYESPEARDFANTFFMMVN
FYSIQRSAELAKEKGETFEHYEGSTYATGEYFNKYIEKEFSPAYEKIAALFEGMHIPTIEDWKELKAFVAENGMYHSYRL
CIAPTGSISYVQSSTASVMPIMERIEERTYGNSKTYYPMPGLASNNWFFYKEAYDMDMFKVVDMIATIQQHIDQGISFTL
FLKDTMTTRDLNRIDLYAHHRGIKTIYYARTKDTGQDSCLSCVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 1e-165 48