Gene Information

Name : fliI (BAM5036_1544)
Accession : YP_007497253.1
Strain : Bacillus amyloliquefaciens UCMB5036
Genome accession: NC_020410
Putative virulence/resistance : Virulence
Product : flagellar-specific ATPase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.14
Position : 1603898 - 1605214 bp
Length : 1317 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12787361, 16113269, 16780875, 17002279; Product type e : enzyme

DNA sequence :
ATGAAGACACAGTATTTAATAGACTCAATTGAAACAGCGGATCCGTACAAGCGCTACGGCAAGGTTAAACGGGTCATCGG
GCTGATGATTGAATCAAAAGGGCCCGAAAGCTCAATCGGAGATGTTTGTCTCATTTATCCGAAAGGCCATGCGAAAAAAG
CGATTAAAGCTGAGGTTGTAGGCTTCCAAGATGAAAACATTCTGTTAATGCCTTATCTGGAAGCGGCCAGCATCGCGCCG
GGCAGCATTGTGGAGGCCACTGGCGAGTCGCTCCGCATCAAAGTAGGCGCGGGTTTAATCGGACAAGTTGTCGACGCGTT
CGGCGAACCTCTTGACGGCCGGGCGCTCCCGAAAGGTTTGTCCCCCGTTTCGACGGAACAGCCGCCGCCAAACCCGATGA
AACGCCCGCCGATACGGGAAAAGATGGGTGTCGGCGTAAGATCGATTGACAGTCTGCTGACGGTAGGAAAAGGGCAGAGA
ATCGGGATTTTTGCCGGAAGCGGAGTCGGAAAAAGCACCCTGATGGGAATGATCGCGAAGCAGACTGAAGCTGATTTAAA
CATTATCGCACTCGTCGGGGAACGGGGGCGCGAGGTGCGTGAATTCATCGAGAAGGATTTAGGCGAAGAAGGCCTGAAAC
GCTCGATAGTCGTAGTCGCGACCTCTGATCAGCCTGCCTTAATGCGTTTGAAAGCGGCGTATACGGCCACCGCCATTGCG
GAGTACTTCCGCGATAAAGGCCGGAATGTGATGTTCATGATGGACTCCGTGACGAGGGTCGCGATGGCGCAGCGGGAAAT
CGGCCTGGCAGCGGGAGAACCGCCGACAACAAAAGGATATACACCTTCTGTGTTCGCTATTTTGCCCCGTTTGCTGGAAA
GAACGGGCGCGAATGAACAAGGAACGATAACCGCTTTTTATACGGTTCTCGTAGACGGAGATGACATGAACGAACCGATT
GCCGATACGGTGCGCGGAATATTAGACGGGCATATCGTTCTCGATCGGGCGCTTGCCAACAAAGGGCAGTTCCCGGCCGT
GAACATCCTGAAAAGCATCAGCAGGGTCATGTCTAATATTTCAGACACAGCGCACAAAGAGGCGGCCAACAAATTCCGCG
ATCTTCTGTCAACTTATCAAAACTCTGAAGATCTCATTAATATCGGAGCTTACAAAAGAGGATCATCAAGAGAAATTGAT
GAAGCGATTCAGTTTTATCCGCAGCTTATTCAATTTTTAAAACAAGGAACGGAAGAACCTGCTCAATTGGAAGACAGCAT
TGCGGCATTGACGAGTCTGACTGGAAAAGAGGAATAA

Protein sequence :
MKTQYLIDSIETADPYKRYGKVKRVIGLMIESKGPESSIGDVCLIYPKGHAKKAIKAEVVGFQDENILLMPYLEAASIAP
GSIVEATGESLRIKVGAGLIGQVVDAFGEPLDGRALPKGLSPVSTEQPPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQR
IGIFAGSGVGKSTLMGMIAKQTEADLNIIALVGERGREVREFIEKDLGEEGLKRSIVVVATSDQPALMRLKAAYTATAIA
EYFRDKGRNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTGANEQGTITAFYTVLVDGDDMNEPI
ADTVRGILDGHIVLDRALANKGQFPAVNILKSISRVMSNISDTAHKEAANKFRDLLSTYQNSEDLINIGAYKRGSSREID
EAIQFYPQLIQFLKQGTEEPAQLEDSIAALTSLTGKEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-96 51
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-97 51
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 2e-96 51
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 4e-97 51
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 3e-97 51
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 3e-97 51
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-96 51
lscN AAO18044.1 LscN Virulence TTSS locus Protein 3e-96 50
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-93 49
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-93 49
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 3e-89 48
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-89 48
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-90 48
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-90 48
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 3e-90 48
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-88 46
escN AAC38383.1 EscN Virulence LEE Protein 7e-82 45
escN NP_290268.1 hypothetical protein Virulence LEE Protein 8e-82 45
escN AAC31513.1 L0034 Virulence LEE Protein 6e-82 45
ECs4568 NP_312595.1 EscN Virulence LEE Protein 8e-82 45
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 6e-82 45
escN YP_003236088.1 translocator EscN Virulence LEE Protein 6e-82 45
unnamed AAL06369.1 EscN Virulence LEE Protein 7e-81 45
escN CAC81862.1 EscN protein Virulence LEE II Protein 3e-81 45
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 4e-81 45
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 4e-72 44
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 2e-77 44
escN YP_003223475.1 translocator EscN Virulence LEE Protein 4e-81 44
escN CAI43874.1 EscN protein Virulence LEE Protein 3e-81 44
escN AAK26715.1 EscN Virulence LEE Protein 1e-80 44
escN AAL57542.1 EscN Virulence LEE Protein 1e-80 44
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 4e-75 43
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-76 43
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-76 43
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-76 43
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 4e-77 43
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 4e-74 43
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 3e-74 43
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 9e-75 43
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 6e-81 42
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 1e-75 42
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 1e-75 42
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-75 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_007497253.1 flagellar-specific ATPase VFG2144 Protein 6e-104 53
fliI YP_007497253.1 flagellar-specific ATPase VFG1254 Protein 5e-98 52
fliI YP_007497253.1 flagellar-specific ATPase VFG0192 Protein 2e-99 50
fliI YP_007497253.1 flagellar-specific ATPase VFG0048 Protein 1e-94 50
fliI YP_007497253.1 flagellar-specific ATPase VFG2499 Protein 7e-93 50
fliI YP_007497253.1 flagellar-specific ATPase VFG0390 Protein 9e-98 49
fliI YP_007497253.1 flagellar-specific ATPase VFG0515 Protein 2e-90 48
fliI YP_007497253.1 flagellar-specific ATPase VFG2331 Protein 2e-89 47
fliI YP_007497253.1 flagellar-specific ATPase VFG0812 Protein 3e-82 45
fliI YP_007497253.1 flagellar-specific ATPase VFG0730 Protein 4e-82 45
fliI YP_007497253.1 flagellar-specific ATPase VFG1008 Protein 9e-69 43
fliI YP_007497253.1 flagellar-specific ATPase VFG2459 Protein 8e-77 41
fliI YP_007497253.1 flagellar-specific ATPase VFG1778 Protein 9e-70 41