Gene Information

Name : pdxS (BAM5036_0012)
Accession : YP_007495756.1
Strain : Bacillus amyloliquefaciens UCMB5036
Genome accession: NC_020410
Putative virulence/resistance : Unknown
Product : glutamine amidotransferase for pyridoxal phosphate synthesis; pyridoxal 5'-phosphate synthase complex, synthase subunit
Function : -
COG functional category : -
COG ID : -
EC number : 4.-.-.-
Position : 18892 - 19776 bp
Length : 885 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 14762015, 15771487, 16157873, 17144654; Product type e : enzyme

DNA sequence :
ATGGCTCAAACAGGTACTGATCGTGTAAAACGCGGCATGGCGGAAATGCAAAAAGGCGGCGTCATCATGGACGTTGTAAA
TGCTGAACAAGCGAAGATTGCGGAAGAGGCGGGAGCTGTCGCCGTAATGGCGTTAGAACGCGTTCCGGCTGATATTCGCG
CTGCCGGCGGTGTTGCCCGCATGGCTGATCCGACAATCGTTGAAGAAGTAATGAATGCTGTATCCATTCCCGTAATGGCA
AAAGCGCGTATCGGACATATCGTTGAAGCGCGTGTCCTTGAAGCAATGGGAGTAGATTACATCGATGAAAGTGAAGTTCT
GACTCCGGCTGACGAAGAATTTCATTTAAATAAAAACGAATATACAGTCCCGTTCGTATGCGGCTGCCGTGATCTCGGCG
AAGCAACGCGCCGTATCGCTGAAGGAGCTTCCATGCTTCGTACAAAAGGCGAACCGGGAACAGGAAACATTGTGGAAGCT
GTCCGCCATATGAGAAAAGTAAACGCGCAAGTGCGCAAAGTTGTTGCGATGAGCGATGATGAGCTGATGACTGAAGCTAA
AAACCTCGGCGCTCCTTATGAACTGCTTCTTCAAATCAAGCGTGACGGCAAACTGCCTGTAGTGAACTTTGCTGCCGGCG
GAGTAGCGACGCCTGCTGACGCGGCATTGATGATGCAGCTTGGCGCTGACGGCGTATTTGTCGGTTCAGGTATTTTCAAA
TCAGACAACCCTGCTAAATTCGCCAAAGCAATTGTTGAAGCAACGACTCATTACACAGACTACAAACTGATCGCTGAGCT
TTCTAAAGAATTAGGCACAGCGATGAAAGGAATCGAAATCTCAAATCTATTGCCGGAACAGCGTATGCAAGAACGCGGCT
GGTAA

Protein sequence :
MAQTGTDRVKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMA
KARIGHIVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEA
VRHMRKVNAQVRKVVAMSDDELMTEAKNLGAPYELLLQIKRDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFK
SDNPAKFAKAIVEATTHYTDYKLIAELSKELGTAMKGIEISNLLPEQRMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-83 64
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 8e-83 63
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-82 63