Gene Information

Name : tnpA (BN4_10635)
Accession : YP_007493023.1
Strain : Desulfovibrio piezophilus C1TLV30
Genome accession: NC_020409
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 659430 - 662354 bp
Length : 2925 bp
Strand : -
Note : -

DNA sequence :
ATGCCTCGCAGAACAGTCCTTTCCTCTTCCCAGAGAACCGTTTTTGAAGTCTTACCAAGCGTTCCGGATTTACTCACACG
GTACTACGTTTTGGACGAAGACGAACTTGCACTTATTTCCAAATGTAGACGGCCACGCAATCGGCTCGGATTTGCTTTAC
AACTCTGTCTCATCAAATTCCCTGGAAGGGCCTTACGACCCGATGATGAAATTCCCGATTCCTTGGTCGAATTCATTGCA
GAGCAAATAGAAGAAGAGTCGGAAGTCTTCTGTGGCTACGCGGACAGAGACCAGACGCGCAGAGAGCATTTTAAGACCTT
GATAGAGTTTTTCCGGCTTTCAAGATTTGGAGATAGTCACTATCAAGAGATGGTGCGCTGGCTGACGCCAATTGCTGTAG
ACAATCCAAAGAGTACTTTCCTTGTAGGTGCAACCCTAAATGAATTGAGACGTCGCAAAATTCTGCATCCTGCTTTGACA
GTTGTGGAACGCCTCGTTGCCCAGGTGAAGATCCAAGCAGATCGCAGAGTCTACAATGAAGTGACCGGCCTGTTGTCCGA
CAGGCACCAGGCTGATCTTAAATTTTGGCTTAATCCACGAGGCGAGAAATCACAGAGTAGACTTTCATGGATTCGTCAAC
CTGCTGGCCGTCCTTCTCCTATAAATGTGATTTTGATAATGGAAAAGTTGGCCGCTATCCGGTTGCTTGGTCTTCCTTCC
GAGGTCTTGGACGCAGTACCGACAATTCGCCGCAAGCAACTTGCCCAAGAAGGTAATCGAATTGCTGTGCATAATCTGCG
AATGTTGAATGAACAAAGACGGTATACGATCATGACCGTATGCTTGCTTGAAATTCAACGCTCCTTAATGGATGAGGTCG
TCAACATGCATGACCGCATCATTGGCTCCCTAATGCGGCGTAGCCAACGAAAACAGGCTACTCAGCTACAAGATGATGCA
AAGAACATCAAAACAACCGTCAACGTTTTCTCAAAGCTTGGCCAAGCCTTAATCAAAGCGCGTGAGGAGCATTTAGACCC
TTGGGAGCTAATCGAGGCTGAACTGTCCTGGGATGATTTTCGTGCAACGGTTGAAGCTGCTGAAAACCTGTCTCAACCTC
AGCGGTTCGATTATCTCCATTATGTTGACACGAGTTTCAATCAGATTCGGCGGTATGCTCCAACCATGTTGGAGCATTTT
GACTTCCGTGCAAGCTCTGGTGGACGGGATGTTCTTACAGCTATTGATATCATCCGTGACATGAACAAAACGGGCAAACG
CAAATTGCCCGACCAAGTTCCTACTTCATTTATCCCAAAACGCTGGCAACCATTTATTTTCGAAACTGATGGCCTGAACC
GTAGGTACTATGAACTGTGCGCTTTAAGCGAACTCCGTAACCGACTCCGTTCTGGCGATGTATGGGTACCAGGCAGCCGT
CAATTCGAAGATTTCAACGAATACCTCATGGGCCCTTCCGCTTTTCGTCAGCTTCAGGAGTCTCGTGAAATACCTGTAGC
GGTCGAAACGGATTGCACAAGATACATCTCAGAGCGGAAAGAACTCCTTGAAAGTCAGTTGGAAGAATTCCAAAGGCTTC
TCAGAAGCAATGATTTGGATACGGTTTGTCTCAAGAATGGTAGGCTTTCAATGCAACCATATAGGGGTAACTCTGTTCCC
GATGAAGCCAAGCAATTCAGCCGGCGCGTATATGCAGAGCTTCCTCGCATTAAAATTACCGATCTCCTCATTGAAGTAGA
TCAATGGACAGGTTTCACCGAACAATTCACTCATTTGAGAACTGGCCAACCATCTCAAGACAAGGAATCTCTTTTGTCAG
TGATTCTCTCAGATGGGATTAATCTTGGACTGACAAGGATGGCAGAGGCTAGTTCCGGGGCCTCGTATAAACAGTTGTCT
TGGGTTTCGGATTGGTATGTCAGAAGCGAATGCTATTCCAGAGGGTTGGCTGAGATAACCAATTACCACCACATAATTCC
ACTTGCAGGACAGTGGGGCGATGGCTCCACCTCGTCTTCAGACGGGCAGCACTTTCCTCTTGGCAGTGTTGGTCGAGGCC
TCGGAGATGTAAATGCCCGATATGGGCGAGATCCCGGTGTGATTTTCTACACCCACATCTCGGATCAATACACCCCATTT
CACAGCCAGCTCATCAACGCAACAGCACGCGATGCAACCTATGTCCTGGACGGCTTGCTTTACCATGAAAGCAATCTCAA
TATTGAAGAACACTACACTGACACCGCAGGTTTTACGGACCATGTGTTTGCTCTTTGCCATTTGCTCGGATTTCGTTTTG
CTCCCCGAATTCGCAACATAGGTGACGTAAAACTATACACCTTTGGCAGCGCAAAACGCTGGGCTGACCTGGAGCCGTTG
ATAGGATCAAAGATCAAGCAAAAGGACATTGAGAACCAATGGGAAGAGATATTGAGGCTGGCAAGCTCAATTCGATTGGG
AACCGTTACGGCATCCCTCATAATTCGTAAGTTGGCCTCCTATCCACGGCAAAACAAATTGGCTTTGGCCATACGCGAGC
TTGGGCGTTTGGAAAGGACTCTTTTCCTATTGGATTGGGTCAAAAAGCCAGAACTCCGTTCTCGTGTTCAAGCCGGTCTG
AACAAAGGGGAGTCCAGAAACGCACTTGCTCGTGCAGTGTTTTTCAATCGACTCGGAGAAGTCCGAGATCGTTCTTTTGA
AAGCCAGTGCTATAGGACTTCTGGTCTAAACCTTGTCGTAGCTACGATAATCCTCTGGAACACGGTCTATCTGGAAAAGG
CCGTGAAAAAAGTACGAGAGGAAATGGATGTTCCGGAGGAGTTTCAGAGCTACCTTTCTCCGCTTGGATGGGAGCACATC
AATCTCACAGGAGATTATATCTGGAATCTTGGCCAAACGCCTTAA

Protein sequence :
MPRRTVLSSSQRTVFEVLPSVPDLLTRYYVLDEDELALISKCRRPRNRLGFALQLCLIKFPGRALRPDDEIPDSLVEFIA
EQIEEESEVFCGYADRDQTRREHFKTLIEFFRLSRFGDSHYQEMVRWLTPIAVDNPKSTFLVGATLNELRRRKILHPALT
VVERLVAQVKIQADRRVYNEVTGLLSDRHQADLKFWLNPRGEKSQSRLSWIRQPAGRPSPINVILIMEKLAAIRLLGLPS
EVLDAVPTIRRKQLAQEGNRIAVHNLRMLNEQRRYTIMTVCLLEIQRSLMDEVVNMHDRIIGSLMRRSQRKQATQLQDDA
KNIKTTVNVFSKLGQALIKAREEHLDPWELIEAELSWDDFRATVEAAENLSQPQRFDYLHYVDTSFNQIRRYAPTMLEHF
DFRASSGGRDVLTAIDIIRDMNKTGKRKLPDQVPTSFIPKRWQPFIFETDGLNRRYYELCALSELRNRLRSGDVWVPGSR
QFEDFNEYLMGPSAFRQLQESREIPVAVETDCTRYISERKELLESQLEEFQRLLRSNDLDTVCLKNGRLSMQPYRGNSVP
DEAKQFSRRVYAELPRIKITDLLIEVDQWTGFTEQFTHLRTGQPSQDKESLLSVILSDGINLGLTRMAEASSGASYKQLS
WVSDWYVRSECYSRGLAEITNYHHIIPLAGQWGDGSTSSSDGQHFPLGSVGRGLGDVNARYGRDPGVIFYTHISDQYTPF
HSQLINATARDATYVLDGLLYHESNLNIEEHYTDTAGFTDHVFALCHLLGFRFAPRIRNIGDVKLYTFGSAKRWADLEPL
IGSKIKQKDIENQWEEILRLASSIRLGTVTASLIIRKLASYPRQNKLALAIRELGRLERTLFLLDWVKKPELRSRVQAGL
NKGESRNALARAVFFNRLGEVRDRSFESQCYRTSGLNLVVATIILWNTVYLEKAVKKVREEMDVPEEFQSYLSPLGWEHI
NLTGDYIWNLGQTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXA24 ABD94633.1 truncated Tn1721 tranposase Not tested ExoU island A Protein 0.0 49
EC042_4089 YP_006098372.1 transposase Not tested Tn2411 Protein 0.0 49
tnpA ACF06153.1 transposase Not tested Tn5036-like Protein 0.0 49
tnpA ACY75538.1 TnpA Not tested Tn6060 Protein 0.0 48
tnpA AAL08440.1 transposase TnpA Not tested SRL Protein 0.0 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnpA YP_007493023.1 transposase VFG1031 Protein 0.0 48