Gene Information

Name : kdsB (BN4_20440)
Accession : YP_007495653.1
Strain : Desulfovibrio piezophilus C1TLV30
Genome accession: NC_020409
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.38
Position : 3564954 - 3565694 bp
Length : 741 bp
Strand : -
Note : -

DNA sequence :
ATGAGCAGCTTTCCCGAATGTCACGGAATAATCCCGGCGAGGTATGCTTCCTCGAGATTTCCCGGCAAACCCTTGGTCAA
AATCCATGGTAAGCCGATGTTTTGGCACGTCTATGAACGGGCGTCCCGGTGCCCCCAGATGAGCAGTGTTACTCTTGCTA
CGGATGATCAACGCATCTATGACGCAGCTCAAGGGCTTGAAGTTCCGGTTGTCATGACATCGGCAACGCACCAGAGTGGT
ACTGACCGAGTCCTGGAAGCAGCCCGTCTGCTCGCTCTCGACACCGAGTCCGTCGTTGTGAACATCCAGGGAGACGAACC
ATGCCTGGAACCGGACATGCTAAGTGAACTGGTATGCCCATTTTCATCCGACCATGTCCGGGTGGCAACGCTCGCGACAT
CTGTTGGATACGAGGAGGCCGTGTCCCCGGACCGGGTCAAGATTGTTCGGGCAAAAAATGGAAGGGCACTCTATTTCTCC
CGATCCATGGTGCCTTTTGACAGGGATGAGAAAATCCATGGATTCCTGCTCCACATCGGTCTCTACGCCTTTCGGATGGA
TGCCCTGGCTCGATTTGGAGAGTTGGCTCCCAGCCCTTTGGAACGAAGAGAAAAACTGGAGCAACTGCGTTTGCTCGAAG
ACGGTATCGATATTTACGTGACAGAAACGAGACACACCTGCCATGGGGTAGACAGCCCACAGGACCTCGAAAAAGCCAAA
GATATTCTGGAGAGAGAGTAA

Protein sequence :
MSSFPECHGIIPARYASSRFPGKPLVKIHGKPMFWHVYERASRCPQMSSVTLATDDQRIYDAAQGLEVPVVMTSATHQSG
TDRVLEAARLLALDTESVVVNIQGDEPCLEPDMLSELVCPFSSDHVRVATLATSVGYEEAVSPDRVKIVRAKNGRALYFS
RSMVPFDRDEKIHGFLLHIGLYAFRMDALARFGELAPSPLERREKLEQLRLLEDGIDIYVTETRHTCHGVDSPQDLEKAK
DILERE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 9e-33 44
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 7e-33 44
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 2e-32 43