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Name : BN4_12249 (BN4_12249) Accession : YP_007494635.1 Strain : Desulfovibrio piezophilus C1TLV30 Genome accession: NC_020409 Putative virulence/resistance : Unknown Product : putative type I restriction enzyme HindVIIP R protein Function : - COG functional category : - COG ID : - EC number : 3.1.21.3 Position : 2390047 - 2393202 bp Length : 3156 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology DNA sequence : ATGACAACTAACGGTAGCTCCCCCATGATTAACGAAGACGCTCTCGAAAAACTCGCCATCAGTTGGTTTGAAGACGAAGG CTACACCAACGTTCACGGCCCGGACTTGAACCCCGAGGTGGACGGGAGCGGGGCGCGGGCGCGGCTGGATGACGTGTTGT TGCTTAACCCGTTGCGTGCGGCCATCGAGCGGATTAATCCCCAGCTTCCGGCAAGCACGGTTGACGAGGTGCTCCATCTG GTTCAGAAGCTGTCCCACCCGATCACGGTCAAGGCAAACCAGGAATTTCATCGGCTACTCCGCGAGGGCGTGGATGTCAG CTACAAGCGGGACGGGGAGAACGTCGAAGACCGCGCCTTCCTCATTGATTTTCACGACGTAAACGCCAACACGTTCTGGA TTGTGGATCAGCTCACCATCCGGGGAAGCAAGGGCAATCGTCGTCCCGACCTGATCGTGTATCTCAACGGCCTGCCGCTG GCCGTCATCGAGTTGAAGTCCCCTGTCAAAGAAGACGTTGGCGTTGACGAGGCCTTTCATCAGCTCCAGACCTACAAGCA GGAGTTGGTGGACCTTGCCATGTTCAACGAGGCGCTGGTGGCCTCGGACGGCATCCAGGCCCGTGTGGGTTCCCTGACCG CCAATCGTGAATGGTTCCTGCCATGGCGTGCCGTAAAGTCGGAAGAGGACCGCCCGTCCTTCGAGTATGAACTCAAGGGC ATTGTGAAAGGCTTCTTCGATCGGACGTTGCTCCTGGAATACATCCGCGATTTCGTCCTGTTCGAGGCGGACGATTCCAG CACGATCAAGAAGATCGCCAGCTACCACCAGTTCCACGGCGTACGCCAAGCCGTGGCCGCAGCCGTGAAAGCGGCTTCGG AACATGCACCGAACGAGCTGAAAGGGCGCGGCGGCGTCATCTGGCACACGCAGGGTTCCGGCAAATCCATCTCCATGTGC TGTCTCGCCGGAAAACTCATCCGCCATCCCGATTTGGCCAACCCGACCCTCGTTGTTATCACCGACCGAAACGACCTGGA CGGGCAGCTCTACGAGACTTTCTGCAAGGCCGGTGATCTGCTGGCCGACAGTCCGATACAGGCGGACGATCGGGGCGAAC TCCGCCAAATTCTCAACGAGAAGCAGTCCGGTGGCATCGTCTTTACCACCATCCAGAAATTTTCCCTCGACAAGGACGAG ACCAAATTCCCGGTCTTGTCCGACCGCCGGAACATCATCGTCATCGCCGACGAGTGCCACCGCTCCCAGTACGGCTTCAA GGGCAAGCTGGATGAAAAGCGGAATGCGTTCGTTGCCGGGTATGCCCAGCACATGCGCGACGCCTTGCCCAACGCCACGT TCACCGGCTTCACCGGCACGCCCATATCCCAAGAGGACAAGAACACCCAGGCGGTGTTTGGCGAATACGTCAGTATCTAC GACATCGAGCAGGCCCAGCTTGATGGCGCGACCGTCCCTATCTTCTACGAAAGCCGCTTGGCCAAGCTCGACCTCAATCA GGATGAGTTGCCGCAAATCGATGAAAAAGTAGACGAGGTAACGGAGGATGAGGAGACCTCCCAGGCCGAAAAAACCAAGG GCAAGTGGGCAGCCCTGGCCAAGCTGGTCGGGGCGGAACCCCGTATCCGGCAGGTAGCCGAAGATCTGGTCGACCACTTT GAAGCCCGCCTGGAGGTCGTGGACGGCAAGGCCATGATCGTCTGCATGAGCCGTGATATCTGCGTTGCAATGTTCGATGC GCTCGTGAAATTGCGTCCGCAATGGGCAGGAAATCAATTGGCTGACGGCACCTATGATCCATCGGACGGGGCAATCAGGA TCATCATGACGGCCAGCGCGTCCGATCGGCGGGAGTTGCAGAACCACCACTACAGCAAGACCCAGAAGAAGGCGCTGGAG AAACGGTTCAAAGACCTGGATGATCCGCTGAAGATCGTCATCGTCCGCGACATGTGGCTGACCGGCTTCGACGCACCGTG CGCACACACCATGTACATCGACAAGCCCATGAAGGGGCACAACCTCATGCAGGCCATCGCTCGCGTAAACCGCGTGTTCA AGGGCAAGCAAGGCGGTCTGGTTGTCGACTACATCGGCATCGCCAGCGAACTGAAGAACGCGCTGCATACCTACACCCGG AGCGGCGGGCGTGGAGGCCAGCCGACTATCGATGTGTACGAGGCGTTCTATGTGCTGAAGGAGAAACTCCAGACGGCACG CGATATCTTCCACAAGTTCGATTACTCAGCCTATAAGACCAAGGCTGTCGAGCTGCTGCCCCCTGCTGCGGACTTTGTTG TCGCCACCGAGGAGCGCAAGAAAGAGTTTTTTGATGTCGTGGTCGCCATGACCCGTGCCCAGTCCCTTTGCGGCACCCTG GACGAAGCCGTGGCCATACGGGATGAGATCACCTTCTTTCAGGCCGTGAAGATCTTCATCGACAAGACGACAGCCACCAA GGGCAAACAAACGCGGCAAGAAAAAGACGCGATCCTGAATCAACTCCTCGCCCGCGCCGTGGTCCCTGAAGGCGTGGACG ACATCTTCGCTCTGGCGGGCCTCGACAAGCCGGATATCTCCATTTTGTCCGAAGAATTCCTCGACGACGTCCGCAACATG GAGCACCGCAACCTAGCCGTCGAATTGCTCGAAAAATTGCTCAGAGACGAAATTAGCGCCCGTTCACGCCGCAATACGAC GCAGGAGCGCAAGTTCTCCGAGCGGCTCAAGGAATCCCTGCTCAAATACCGTAATCGCGCCATCGAAACCGCCCAGGTCA TCGAAGAACTTATCCAGATGGCCAAGGACTTGAACGAAGCGCTCAAGCGCGGCGACAAGCTCGGCCTCAACCCCAGCGAA CTGGCATTCTATGACGCCCTGGAAGAGAACGAGTCTGCCGTCCGTGAATTAGGTGATGACGTCCTCAAGAAGATAGCCAA GGAACTGACCGAGAAGCTCAGGAAGAATGTGACGGTAGACTGGCAGCATAAGGATTCGGTCCGAGCAAAGATGCGGAACT TGGTTCGCAGGATTTTGAAGAAGTACAAGTACCCGCCGGATGCCCAGAAAGAGGCCGTGGCCGAGGTGCTGCGGCAGGCC GAGAGCTTGGCGGATGATTGGAGCGAGGCAGCGTAA Protein sequence : MTTNGSSPMINEDALEKLAISWFEDEGYTNVHGPDLNPEVDGSGARARLDDVLLLNPLRAAIERINPQLPASTVDEVLHL VQKLSHPITVKANQEFHRLLREGVDVSYKRDGENVEDRAFLIDFHDVNANTFWIVDQLTIRGSKGNRRPDLIVYLNGLPL AVIELKSPVKEDVGVDEAFHQLQTYKQELVDLAMFNEALVASDGIQARVGSLTANREWFLPWRAVKSEEDRPSFEYELKG IVKGFFDRTLLLEYIRDFVLFEADDSSTIKKIASYHQFHGVRQAVAAAVKAASEHAPNELKGRGGVIWHTQGSGKSISMC CLAGKLIRHPDLANPTLVVITDRNDLDGQLYETFCKAGDLLADSPIQADDRGELRQILNEKQSGGIVFTTIQKFSLDKDE TKFPVLSDRRNIIVIADECHRSQYGFKGKLDEKRNAFVAGYAQHMRDALPNATFTGFTGTPISQEDKNTQAVFGEYVSIY DIEQAQLDGATVPIFYESRLAKLDLNQDELPQIDEKVDEVTEDEETSQAEKTKGKWAALAKLVGAEPRIRQVAEDLVDHF EARLEVVDGKAMIVCMSRDICVAMFDALVKLRPQWAGNQLADGTYDPSDGAIRIIMTASASDRRELQNHHYSKTQKKALE KRFKDLDDPLKIVIVRDMWLTGFDAPCAHTMYIDKPMKGHNLMQAIARVNRVFKGKQGGLVVDYIGIASELKNALHTYTR SGGRGGQPTIDVYEAFYVLKEKLQTARDIFHKFDYSAYKTKAVELLPPAADFVVATEERKKEFFDVVVAMTRAQSLCGTL DEAVAIRDEITFFQAVKIFIDKTTATKGKQTRQEKDAILNQLLARAVVPEGVDDIFALAGLDKPDISILSEEFLDDVRNM EHRNLAVELLEKLLRDEISARSRRNTTQERKFSERLKESLLKYRNRAIETAQVIEELIQMAKDLNEALKRGDKLGLNPSE LAFYDALEENESAVRELGDDVLKKIAKELTEKLRKNVTVDWQHKDSVRAKMRNLVRRILKKYKYPPDAQKEAVAEVLRQA ESLADDWSEAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 58 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 45 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 45 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 45 |
