|
Name : BN4_12245 (BN4_12245) Accession : YP_007494631.1 Strain : Desulfovibrio piezophilus C1TLV30 Genome accession: NC_020409 Putative virulence/resistance : Unknown Product : putative type I restriction enzyme HindVIIP M protein Function : - COG functional category : - COG ID : - EC number : 2.1.1.72 Position : 2385407 - 2387059 bp Length : 1653 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology DNA sequence : ATGACAGCGTTGGAACAATATGCGTTTCTCAAGAATATGGAGAAGCGGCTGTGGGCTGCCGCTTGCAAACTCCTGCCTTC TCTGGATGCGGCTGTGTACAAGCACGTCGTGCTCGGGTTGGTCTTTCTGAAATATGTCGGGGACAGCTTCGTGCAACGCC AGGAGGAGCTGAAGGCTCAGTTCGCTAACCCCGACCATGAGTACTTTCTCGATGATGACCTGGAAGACGAGGAACTCCTG AACGACGAGTTGGAGGAGCGCGACTACTACACCGAGGCCAACGTGTTCTGGGTGCCGGAGAAAGGCCGCTGGTCCACGTT GCTCGAATGCGTGAAGCTCAACCCCGGCTCCAAGCTGCCCTGGGGGGCGGAATTCAAGAGCGTGGGCAACCTGCTGGATG ATGCCATGGACGCCATCGAGAAGGAGAACCCGGTCCTCAAGAATGTGTTGAGCAAGGACTTTGCCCGGCTTCAGGTGGAA AGCTCCAAGCTGGCCGAGGTCATGGACCTGATCAACACCATTCCGTTTGAGCATGAGAGCCTGAAGGCCAAGGATATCCT TGGGCATGTGTATGAATATTTCCTGGGGCAGTTCGCGGCGGCGGAAGGCAAGAAGGGCGGCCAGTATTACACGCCCAAAT CCATTGTTACGCTGATCGTTGAGATGCTCCGTCCCTACCAGGGGCGTGTGTATGACCCCGCTTGCGGCTCAGGCGGCTTT TTCGTTTCCAGTGAGGAATTCGTCGAGGCCCATGGCGGCAAGGTCGGCAATCTGTCCATCTACGGGCAGGAATCCAACCC GACGACCTGGAAGCTGGCAGCCATGAACATGGCCATTCGCGGCATTGAGTTCGACTTCGGCAAGGAGCCTGCCGACACCT TTGGCAATGATCAGCATGCCGACAAGCGCTTTGACTACATCATGGCGAACCCTCCGTTCAACATCAGCGGGTGGGGCGCG AACAAGCTGGCTGACGACGTGCGCTGGAAATACGGCCTGCCGCCGGACAGCAACGCCAACTTTGCGTGGATGCAGCACAT GATCCACCACCTTGGCCCCAAGGGCAAAATGGCCCTGCTGCTGGCCAATGGCTCCATGTCCACCGCGACCAACGGTGAAG CGGATATCCGCCGTCAGATTGTCGATGCGGATCTGGTGGAATGCATCGTGGCCCTGCCTGGACAGCTTTTCACCAACACG CAGATCCCGGCCTGTATCTGGTTCCTGAACAAGGACAAATCCAACGGCCAGAATATTGAGACATTGCGTGACCGGACTGG CGAGGTGCTGTTCATCGACGCCCGGAATTGCGGCTACATGATCGACCGTGTCCTGCGAGACTTGGACCGCGAGAAAGACA TCCTGCGGATAGCGCATACCCTGTTGAATTGGCAGATGGGCGACAAGGCCGAGACGCCGTATGCGGACGAGGCCGGATTC TGTGCCTCGGTCGAATTGAAGGATATCCGCAAGCATGACTATGTCCTGACGCCGGGCCGATATGTCGGCGCTCCCGAAGA AGTGGACGACGGCATCCCGTTTGGGGAAAAGATGGCGGTATTAACCTCGACATTGTTTGAGCAGATGGCCGAGGGGCAGC GGTTGGATGGCGAGATTCGAGCAAACCTGGAGAAGCTGGGCTATGCCGAATAA Protein sequence : MTALEQYAFLKNMEKRLWAAACKLLPSLDAAVYKHVVLGLVFLKYVGDSFVQRQEELKAQFANPDHEYFLDDDLEDEELL NDELEERDYYTEANVFWVPEKGRWSTLLECVKLNPGSKLPWGAEFKSVGNLLDDAMDAIEKENPVLKNVLSKDFARLQVE SSKLAEVMDLINTIPFEHESLKAKDILGHVYEYFLGQFAAAEGKKGGQYYTPKSIVTLIVEMLRPYQGRVYDPACGSGGF FVSSEEFVEAHGGKVGNLSIYGQESNPTTWKLAAMNMAIRGIEFDFGKEPADTFGNDQHADKRFDYIMANPPFNISGWGA NKLADDVRWKYGLPPDSNANFAWMQHMIHHLGPKGKMALLLANGSMSTATNGEADIRRQIVDADLVECIVALPGQLFTNT QIPACIWFLNKDKSNGQNIETLRDRTGEVLFIDARNCGYMIDRVLRDLDREKDILRIAHTLLNWQMGDKAETPYADEAGF CASVELKDIRKHDYVLTPGRYVGAPEEVDDGIPFGEKMAVLTSTLFEQMAEGQRLDGEIRANLEKLGYAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 5e-145 | 57 |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 4e-125 | 48 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 4e-124 | 48 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 1e-125 | 48 |
