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Name : lysS (BN4_10196) Accession : YP_007492587.1 Strain : Desulfovibrio piezophilus C1TLV30 Genome accession: NC_020409 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 197941 - 199455 bp Length : 1515 bp Strand : + Note : - DNA sequence : ATGCCAATGCTCGAGGCCCTGCAGGCCAAAGACGAGCTGAATGCTGTTATTAAGACGCGTGTCGAGAAAGCGTGCGGACT TTTGGATGAGAATATCCATCTCTATCCGAACGACTTTCACAGAGACACCGAAATTCAATCCATCCTGGATGCTCATACGG AGACTGCAGACACTGAGCTGGAAACTACTGACCAGAAATTCGCCATTGCCGGGCGAGTTGTCTCATATCGTTCTTTTGGC AAGGTGACATTTTTTCACTTGCAGGACTGTAGTGCAAAGATTCAAGTCTATGTCGCCAGAGATGAACTGGGAGCTGAGGC ATACAGAAAATTCAAAAAGACTGATATTGGGGATATTGTTGGAGTCATAGGTACTCTTTTCCGGACCAAGACTGGTGAGT TAACGGTGAAAACCAAAAGCTTTAAATTGGTCACCAAGTCCATGCGTCCGTTGCCTGAGAAATATCACGGATTGAAAGAC GTTGAGACGCGGTATCGCCAAAGGTATGTGGATTTGATTGTCACTCCACGTACCAAGGAAATTTTCAAAATTCGCACTGC TATTGTTCGTGAATTACGGGATTTTCTTGATGAAAAAGGGTTTATGGAAGTTGAAACTCCTATGATGCAAGCCATCCCCG GAGGAGCCACTGCCAAACCTTTTGAGACCCATCATAATGCTCTTGATATGAAATTGTATATGAGGATCGCGCCAGAGTTA TACCTCAAGCGCCTTCTTGTTGGCGGATTTGAACGAGTATATGAAATTAATCGAAATTTCCGTAATGAGGGCATTTCGAC TCAGCATAACCCTGAATTTACTATGCTGGAGTTTTATTGGGCCTACGCCAATTTTGAAAACCTGATGGATTTGACTGAAG AGATGTTCTCACGGGTTGCCAAAAAGGTGACAGGTTCATCTGTTGTCCCGTATCAGGGTGAGCAGATAGACCTCTCTGTT GGAGCATGGATCAGAATGCCTTTTCATGATTCTTTGGAAAAAGTCGGAGGAGTGTCCAAGGATATCTACTCTGACTATGA AAAATGTAAGGCTTTGGTGAAGGCAAAAGGCGAGAAGGTTGTCGAAGGAGAGGTTTTAGGAAAACTTCAGGCAAAACTTT TTGATATTCTCGTTGAGCCAAAACTTATCCAACCTCATTTTATTTATCATTATCCGACGGATATTTCTCCACTCTCTCGG CGGAATGAAGTGAACCCGGAGATTACGGATCGTTTTGAGTTGTTTATGACTGGGCGCGAAATGGCCAATGCCTTTTCAGA GTTGAATGATCCGGTTGACCAACGCGGACGTTTCGAAGACCAGGTTGCAGAAAAGGAAGCCGGTGATGAGGAAGCCCATT TCATGGATGAGGATTATGTCCGTGCTCTTGAATATGGTATGCCGCCAGCGGCAGGGCAAGGGGTTGGTATAGATCGTCTT GTCATGTTGTTGACCGACAGTGCTTCTATTCGTGAAGTCATTTTGTTCCCATTACTCAGACCGGAGGTTGGGTAA Protein sequence : MPMLEALQAKDELNAVIKTRVEKACGLLDENIHLYPNDFHRDTEIQSILDAHTETADTELETTDQKFAIAGRVVSYRSFG KVTFFHLQDCSAKIQVYVARDELGAEAYRKFKKTDIGDIVGVIGTLFRTKTGELTVKTKSFKLVTKSMRPLPEKYHGLKD VETRYRQRYVDLIVTPRTKEIFKIRTAIVRELRDFLDEKGFMEVETPMMQAIPGGATAKPFETHHNALDMKLYMRIAPEL YLKRLLVGGFERVYEINRNFRNEGISTQHNPEFTMLEFYWAYANFENLMDLTEEMFSRVAKKVTGSSVVPYQGEQIDLSV GAWIRMPFHDSLEKVGGVSKDIYSDYEKCKALVKAKGEKVVEGEVLGKLQAKLFDILVEPKLIQPHFIYHYPTDISPLSR RNEVNPEITDRFELFMTGREMANAFSELNDPVDQRGRFEDQVAEKEAGDEEAHFMDEDYVRALEYGMPPAAGQGVGIDRL VMLLTDSASIREVILFPLLRPEVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-111 | 51 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-80 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007492587.1 | Lysyl-tRNA synthetase | VFG1668 | Protein | 1e-111 | 51 |
