|
Name : H175_233p185 (H175_233p185) Accession : YP_007492388.1 Strain : Genome accession: NC_020394 Putative virulence/resistance : Unknown Product : Retron-type RNA-directed DNA polymerase Function : - COG functional category : - COG ID : - EC number : 2.7.7.49 Position : 225716 - 227548 bp Length : 1833 bp Strand : + Note : - DNA sequence : ATGTTAAAGAAAACCAAACTAAGACACAATGAATATTACAACATGCAAAGTAAGTATGATGAATTATATTCCAGTAGTCT TAACGGTAACAATTTTTACAAATTGATTAACATTATCGGTTCTGAAGAAAATATTCGATTAGCATATCGCAACATTAAAA CCAATAAGGGGAGTAAAACTCCTGGAGTTGATAATTTAACTATTAAAGATATTTGGCATTTAAATGATACAAAGATTATT CATGAAGTCAGAAAACGTTTAGGTGATTACAAACCACAAGCTGTTAAAAGAGTTTTTATTCCTAAAGAGGGAAGTGACAA AAAGCGACCTCTGGGTATTCCTACAATTTGGGACAGGTTGGTACAACAATCTATTCTCCAAGTATTAGAACCTATTTATG AAGCGAAATTCCATAACCATAGTTATGGTTTTAGACCAAACAGAAGTGCCCATCATGCTCTTAGTAGAGTGGTAAGCCTA ATCAACATAGGGAACCAACATTACTGTGTTGACATTGATATTAAAGGTTTCTTTGATAACGTTGACCACGGAAAATTGCT AAAACAAATGTGGACACTGGGAATAAGAGATAAATCGCTTTTATGTGTTATTTCGAAAATCCTAAAATCTGAAATTGAAG GAGAGGGTATTCCTAGTAAAGGAACTCCGCAAGGAGGGATTATTTCTCCCTTACTTTCAAATATCGTTCTAAACGAACTG GACTGGTGGGTTAGTAGTCAATGGGAAACCTATAAACCTCATAGAATTTCTACTAAGCATTTAGGATTTCGGCAGTATGC CAGGAAATATACAAACTTAAAATGTGGTTACATCGTACGCTATGCTGATGACTTCAAAATAATGTGCCGAACTTATGAGG AAGCACAACGCTTTTATCATGCGACTGTTGACTTTCTTCAATCCCGTTTGGGATTGGAAATCAATCCAGATAAATCTAAA GTAGTTAATCTTAAGAAGAATGCATCGGATTTTCTTGGCTTTAAAATCAAAGTTGTACAACAAGGTAAAGCCAAATTCGG ATATATTGCTAAAACCAGTATGTCTGACAAGGCTGTTACTAAAACGAAACGACTATTGAAAGAGAAAATCAAAGATATTC AAAAAGTACCTACTTCAGAAAGTGTTAACAAGTTTAACATAGCTCTTATTGGTGTACAGAATTATTATAAATACGCAGTC ACAATTTATATGGATTTAACAGTGGTGAAGTATACTCTTTGGAAAACCATAAGAGTCAGACTTAGGTATAAAATGAAGCA CATAAAATTTTGTAACACATCTGCTAATTTCAAAAAGAAAGCCAGAGGAATACAACCAAATTCTAAAATTTACGTTGTGC AAAGAACTCCGCTCTTACCAATTACAGGTGTGCATCATAAAAATCCGTGGAATTTCTCACAGGTTGTCTGTAATTATACA GAGAAAGGACGTAACAAAGTGCATAGTAATTTGAGAGCAATACCAAAAGATGTTCTTAATCAAGTTATGAACACCTACTC GAAGAGTAGAAGTATTGAGTACAACGATAATCGGATATCTAAATACGTTGCTCAATATGGAAAGTGTTATATAACCGGTG AAGAAATCGGTGTTGATCGTGTACATTGTCACCATATTATTCCCATTAACCAAGGTGGGAACGACAAGTACAACAACTTG GTTATTGTAGATTGGTTTATACACAAGCTAATACACATGACAAATCACACCAAGATTAAACGATACCTTCGGTCTTTCAA TCTTAACGAGAAGCAAATGGATAAATTAAATGTGCTAAGAACCAAAGCTGGCAATGAACCGATAGTAATATAA Protein sequence : MLKKTKLRHNEYYNMQSKYDELYSSSLNGNNFYKLINIIGSEENIRLAYRNIKTNKGSKTPGVDNLTIKDIWHLNDTKII HEVRKRLGDYKPQAVKRVFIPKEGSDKKRPLGIPTIWDRLVQQSILQVLEPIYEAKFHNHSYGFRPNRSAHHALSRVVSL INIGNQHYCVDIDIKGFFDNVDHGKLLKQMWTLGIRDKSLLCVISKILKSEIEGEGIPSKGTPQGGIISPLLSNIVLNEL DWWVSSQWETYKPHRISTKHLGFRQYARKYTNLKCGYIVRYADDFKIMCRTYEEAQRFYHATVDFLQSRLGLEINPDKSK VVNLKKNASDFLGFKIKVVQQGKAKFGYIAKTSMSDKAVTKTKRLLKEKIKDIQKVPTSESVNKFNIALIGVQNYYKYAV TIYMDLTVVKYTLWKTIRVRLRYKMKHIKFCNTSANFKKKARGIQPNSKIYVVQRTPLLPITGVHHKNPWNFSQVVCNYT EKGRNKVHSNLRAIPKDVLNQVMNTYSKSRSIEYNDNRISKYVAQYGKCYITGEEIGVDRVHCHHIIPINQGGNDKYNNL VIVDWFIHKLIHMTNHTKIKRYLRSFNLNEKQMDKLNVLRTKAGNEPIVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2326 | NP_815981.1 | group II intron reverse transcriptase maturase | Not tested | Not named | Protein | 4e-118 | 45 |
