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Name : H175_233p111 (H175_233p111) Accession : YP_007492315.1 Strain : Genome accession: NC_020394 Putative virulence/resistance : Unknown Product : Retron-type RNA-directed DNA polymerase Function : - COG functional category : - COG ID : - EC number : 2.7.7.49 Position : 151850 - 153646 bp Length : 1797 bp Strand : - Note : - DNA sequence : ATGCAGTCTACACTAGATGACTTGTATCAGCAAAGTCAAAACGGTAACAACTTTTATAAATTAATAGAGCTTATGAAGAT GGATGAAAACATACGTTTAGCATATCGAAATATAAAAAGAAATATGGGAAGTCTGACAGCTGGAACAGATGGAATGACAA TTAATGATATTAAAATGCTTTCAACGGATGAAGTGATAGAAAAAGTAAGAACGATGTTTGGTTGGTATGAACCACAATCT GTAAGACGCGTATTTATACCAAAACCAAATGGAGACCGTAGACCTTTAGGGATACCAACCATATGGGACAGATTATTTCA GCAATGTGTATTGCAAATATTGGAACCAATATGCGAAGCGAAATTTCATAACCATAGTTACGGTTTTCGCCCTAACCGAA GTACACATCATGCACTAGCGAGAATGAAATCTTTAGTGAATAGAAAAGGAAACGGATTTCACTACTGTGTGGATATAGAC ATTAAAGGTTTCTTTGACAATGTGCATCATGGAAAACTTCTAAAGCAATTGTGGACGATAGGTATACGAGATAAGAAATT ACTTTCTATCATTTCAAGACTACTGAAAGCAGAAATTGTAAATGAGGGTGTTCCTCAAAAAGGTACTCCGCAAGGAGGAA TACTAAGTCCGCTTCTATCTAATATCGTACTCAACGAATTAGATTGGTGGGTAAGTAACCAATGGGAAACGATAAAGACC TCACATCCATATAAGGGAAATAGTGAAAAATATCGAGCGCTAAAGAAAAGCAAATTAAAGGAATGTTTCTTAATTCGATA TGCAGACGATGCAAAAATATTATGTCGTGATTATGTAACGGCTTTAAAAATGTTTGAAGCAACAAAAGACTTTCTTAGAA CACGCCTACATCTGGATATTAGCCTTGAAAAATCAAAGATTATAAATTTGAGGAAAAAAGCGAGTCACTTTTTAGGCTTT ACAGTTAAGGCAAATAAGAAAGGAAACAAACATGTGGCTCATAGCAGAATGTGTGTAAAATCCAGAAAACATGCGTATAG CAAGCTGAAAAAGGCTGTTAAAGATATAAGCAGAGAACAAACACCAGAATCAGTATGGCGATTTAACACGACTGTAATGG GAATACAAAATTATTATTCAGCCGCCACACATATTAATCACGATCTAGATCACATGAGTTGCCATCTCATAAGAACACTC TATAATCGACTGAGGCGAGATTGGAAAAAAGCCACTAAGAGTGACATGTCGACTGTATTAAGGAAAAGATATAAACGATA CAATCCTAAATTGTATAAAATCAAAGACATCGTATTACTACCTATCCATGCGCAGAAGCACAAACCGGCTAGAAATTTTA CTCAGTCTATCTCAAATTATACAAAAGAAGGTAGAGAGAAAATACATGATACGCTAAAAGCCGTAGATAGGGAGACACTC CGACATGTACATCGTTTTTATATGAAGCATCGAACAGTAGAATACAACGATAACAGAATTGCAAAGTTTATTGCACAGTA TGGAAAATGTGCAATTACGAAACAAGAAGTTGGATTAGTAGGTTGGCACTGTCATCATAAAATTCCGTTGGAATTTGGGG GACAGGACAATTATGAAAATCTGGTAATTGTACTAGAAGACATACACATAGCAATTCATAGCGATGATTCAGATAAGGCA AAATCAATCTTAAATAAGTACGACATTATTGAAGATAAGAAAGTGATGTTTGACAAGCTGAGAATATCAGCGCGTCGACA TCCTATCTTTGCTTCAATACAAAAGTTGGTCAATTGA Protein sequence : MQSTLDDLYQQSQNGNNFYKLIELMKMDENIRLAYRNIKRNMGSLTAGTDGMTINDIKMLSTDEVIEKVRTMFGWYEPQS VRRVFIPKPNGDRRPLGIPTIWDRLFQQCVLQILEPICEAKFHNHSYGFRPNRSTHHALARMKSLVNRKGNGFHYCVDID IKGFFDNVHHGKLLKQLWTIGIRDKKLLSIISRLLKAEIVNEGVPQKGTPQGGILSPLLSNIVLNELDWWVSNQWETIKT SHPYKGNSEKYRALKKSKLKECFLIRYADDAKILCRDYVTALKMFEATKDFLRTRLHLDISLEKSKIINLRKKASHFLGF TVKANKKGNKHVAHSRMCVKSRKHAYSKLKKAVKDISREQTPESVWRFNTTVMGIQNYYSAATHINHDLDHMSCHLIRTL YNRLRRDWKKATKSDMSTVLRKRYKRYNPKLYKIKDIVLLPIHAQKHKPARNFTQSISNYTKEGREKIHDTLKAVDRETL RHVHRFYMKHRTVEYNDNRIAKFIAQYGKCAITKQEVGLVGWHCHHKIPLEFGGQDNYENLVIVLEDIHIAIHSDDSDKA KSILNKYDIIEDKKVMFDKLRISARRHPIFASIQKLVN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2326 | NP_815981.1 | group II intron reverse transcriptase maturase | Not tested | Not named | Protein | 2e-98 | 43 |
