Gene Information

Name : MmTuc01_0978 (MmTuc01_0978)
Accession : YP_007489649.1
Strain : Methanosarcina mazei Tuc01
Genome accession: NC_020389
Putative virulence/resistance : Resistance
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 947467 - 948348 bp
Length : 882 bp
Strand : -
Note : -

DNA sequence : 
ATGAATTCCAAAACAGCTGATCATGAAGTTTCTTTTCCCGATGTTTCCTCTCTGGAAACAGACGCTAGAGATGAAAATAA
GGAAAAGTTGTTTTCGGAAGAAAAACTTTCTTATAGTGAAACTTCTGATACAGAGTCCTTTAAATGTGAGTTGTCCCATT
CTGGTCAATCAGGCAGTAATGGTAGAGGAAAAAGTCAACCTGGGCCTCCAGTAATAGAAGTCATAAACGTCAAGAAGAGT
TATACCCTGGGAGATATGGAAGTTCCCATTCTCAGCGATGTTAACCTTACAGTATATGCGGGGGAATTTCTTGCTATAAT
GGGCCCTTCAGGTTCTGGAAAAAGCACACTTATGAACCTTATAGGCTTTCTTGATAGGCCTACGGAAGGAAAAATCCTGA
TTAAAGGCCGTGATATTGTTAAACTATCTGATAAGGAAGTTGCCAGGCTCAGAGGGCTTGAAATTGGTTTTATTTTTCAG
ACGTTCAATCTAATCCCGAGGCTCACAGCCCTTGAGAATGTTGAGTTGCCCACCTATGCTAACTCACGAGAAGGTGTGGA
TACGCGCAAAAGGGCAAAAGAACTTCTTGATATGGTCGGGCTTGCGGACCGCATGCACCATAAACCCGGTGAACTTTCCG
GAGGACAGTCGCAAAGGGTAGCCATTGCCAGAGCTCTTATTAATGACCCGGCAATCCTTCTTGCCGATGAACCCACAGGA
AATCTGGACTCTAAAACAGGCTGTGAAATTCTTGGCATGTTCGCCAGACTTAACAAAGACGGCAGGACTATTATAATGAT
AACTCATGACCCAGAAATTGCGAAATATGCTGACAGGGTAGTACTCGTAAAAGACGGAATAATCCAGAGCAATACAGAAT
AA

Protein sequence : 
MNSKTADHEVSFPDVSSLETDARDENKEKLFSEEKLSYSETSDTESFKCELSHSGQSGSNGRGKSQPGPPVIEVINVKKS
YTLGDMEVPILSDVNLTVYAGEFLAIMGPSGSGKSTLMNLIGFLDRPTEGKILIKGRDIVKLSDKEVARLRGLEIGFIFQ
TFNLIPRLTALENVELPTYANSREGVDTRKRAKELLDMVGLADRMHHKPGELSGGQSQRVAIARALINDPAILLADEPTG
NLDSKTGCEILGMFARLNKDGRTIIMITHDPEIAKYADRVVLVKDGIIQSNTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MmTuc01_0978 YP_007489649.1 ABC transporter, ATP-binding protein NC_012469.1.7686878. Protein 1e-56 55
MmTuc01_0978 YP_007489649.1 ABC transporter, ATP-binding protein NC_008702.1.4606598. Protein 3e-42 50
MmTuc01_0978 YP_007489649.1 ABC transporter, ATP-binding protein CP001581.1.gene798.p Protein 7e-42 48
MmTuc01_0978 YP_007489649.1 ABC transporter, ATP-binding protein CP001581.1.gene598.p Protein 1e-38 43
MmTuc01_0978 YP_007489649.1 ABC transporter, ATP-binding protein NC_012469.1.7685735. Protein 4e-33 42