Gene Information

Name : MmTuc01_2971 (MmTuc01_2971)
Accession : YP_007491513.1
Strain : Methanosarcina mazei Tuc01
Genome accession: NC_020389
Putative virulence/resistance : Virulence
Product : Transcriptional regulator, Hth-3 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2934305 - 2934511 bp
Length : 207 bp
Strand : -
Note : -

DNA sequence :
GTGAAAACAAGGATCAAAGAGTTTCGGGCAAGGCATGACCTGACCCAGGAAGCTCTTGCAAACCTGGTGGGAGTTCGGAG
AGAAACTATTGTTTTTCTGGAAAAAGGGAAATATAACCCCTCTCTGAAACTTGCCTGCAGGATAGCCAGATCTCTGGATA
CCACAATTGATGAACTGTTTATCTTTGAGGACACTGACTTTGAATAA

Protein sequence :
MKTRIKEFRARHDLTQEALANLVGVRRETIVFLEKGKYNPSLKLACRIARSLDTTIDELFIFEDTDFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 6e-09 49
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 2e-06 43
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 1e-06 43
SAV2026 NP_372550.1 hypothetical protein Not tested vSa4 Protein 2.1 41
SA1833 NP_375134.1 hypothetical protein Not tested vSa4 Protein 2.1 41
unnamed ABJ97303.1 regulatory protein with helix turn helix motif Not tested SaPI2 Protein 1.5 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MmTuc01_2971 YP_007491513.1 Transcriptional regulator, Hth-3 family VFG2175 Protein 5e-07 43
MmTuc01_2971 YP_007491513.1 Transcriptional regulator, Hth-3 family VFG2168 Protein 5e-07 43