Gene Information

Name : phoB (btf_95)
Accession : YP_007484547.1
Strain : Dehalococcoides mccartyi BTF08
Genome accession: NC_020387
Putative virulence/resistance : Virulence
Product : phosphate regulon transcriptional regulatory protein PhoB (SphR)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 98894 - 99586 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence : 
ATGCCTGAGCATAAAATATTGGTAGTTGAAGATGATGCCACTCTGCGGGAACTTTTGTGTTATAACCTTGCCAAAGAAGG
GTATCAGCTGGAATGTGCTGAAGACGGGCTGAAGGCACTTAGTGTTTACCGCCTGTTTAAGCCGGCACTGGTTATACTGG
ATGTTATGATACCGGGTATAGACGGCTTTGAACTCTGCCGCCTTATCCGCGCCGAGAGCAGTGTTCCCATACTTATGCTG
ACTGCCCGTTCAAGTGAGGCAGACAAAGTAAACGGGCTGGAAGCGGGGGCGGATGATTATCTGTCCAAACCCTTTGGCAT
GAAGGAACTGCTGGCCAGAATGAGGGCTCTCCTTCGCCGCAGCCAGATGTTGAACTCTCAGGCAGATATAGCAGGCGGGC
TGAAGATAGGCGATTTGGAGATATTTATTGAACGCCATCTGGTAATACGGAACGGAGTTGCTCTGGATTTTTCCCCGAAA
GAATTTGACCTGTTTAGCTTTTTAGTGCAGAACCGCTATCGGGTTTTCAGCCGGGAACAACTGCTGGAAAAGGTCTGGGG
TTATGACTATCCCGGCGGTACCCGTACGGTGGATGTGCATATAAGCTGGCTTCGCCAGAAGATAGAGGTTGATCCCTCCA
AACCCCGCCACCTGATAACTGTCAGGGGAACCGGCTACAAGTTTGAGGAGTAG

Protein sequence : 
MPEHKILVVEDDATLRELLCYNLAKEGYQLECAEDGLKALSVYRLFKPALVILDVMIPGIDGFELCRLIRAESSVPILML
TARSSEADKVNGLEAGADDYLSKPFGMKELLARMRALLRRSQMLNSQADIAGGLKIGDLEIFIERHLVIRNGVALDFSPK
EFDLFSFLVQNRYRVFSREQLLEKVWGYDYPGGTRTVDVHISWLRQKIEVDPSKPRHLITVRGTGYKFEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-30 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_012469.1.7685629. Protein 1e-41 48
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_002952.2859905.p0 Protein 4e-43 46
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_002758.1121668.p0 Protein 4e-43 46
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_009641.5332272.p0 Protein 4e-43 46
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_013450.8614421.p0 Protein 4e-43 46
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_007793.3914279.p0 Protein 4e-43 46
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_002745.1124361.p0 Protein 4e-43 46
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_009782.5559369.p0 Protein 4e-43 46
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_002951.3237708.p0 Protein 4e-43 46
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_007622.3794472.p0 Protein 4e-43 46
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) AE000516.2.gene3505. Protein 6e-46 46
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_003923.1003749.p0 Protein 4e-43 45
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) HE999704.1.gene2815. Protein 6e-43 45
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) AE016830.1.gene1681. Protein 1e-41 43
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_012469.1.7686381. Protein 4e-37 43
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) AF155139.2.orf0.gene Protein 2e-33 42
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) AE015929.1.gene1106. Protein 3e-25 41
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) FJ349556.1.orf0.gene Protein 2e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) VFG1390 Protein 2e-34 44
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) VFG1389 Protein 4e-28 44
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) VFG1563 Protein 2e-30 42
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) VFG1702 Protein 2e-30 42
phoB YP_007484547.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) VFG1386 Protein 2e-30 42