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Name : lysS (btf_539) Accession : YP_007484986.1 Strain : Dehalococcoides mccartyi BTF08 Genome accession: NC_020387 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 506152 - 507648 bp Length : 1497 bp Strand : - Note : - DNA sequence : ATGCCGGAAGAATATTTAAACGCTCAAAAGATGGAAAAACTTGAACGGATAAAGAGCCGGGGTATCAACCCTTATCCGTC CACTTTTCATCCCAGCCATACCAGCGCACAGGCAGTTGCTTTGCTGGTTGAGATTGAAACACAGGAAAATCATCTGAAGG AAGTCCTTAAGCTTGCCGGACGGATAATGACCCGCCGTGATATGGGCAAGATTTCCTTTATGGATATACGTGACGGCAGT GGTAAAATGCAGATTTTTTTCCGTCAGAATGACCTTGACGAAGCCAGTATAGAACTGCTTAAAGACTTGGATTTGGGTGA TTTTATCGGGGTAGAGGGTAGCCTGATGCGTACCCGCACTGGTGAGCCCAGTCTGGCTGCTACCAAAGTAAGTATGCTTT CAAAATCACTCCTGCCTCTGCCTGAGAAATGGCACGGCCTGCAAGATGTAGAGAAACGCTACCGCCAGCGTTACCTTGAC CTGATTTCCAACGCAGATGCCCGCCAGACCTTCCTGACCCGCAGCCGGGTTATCAGTGTTATACGTGCCTTTATGAATGC TAAAGGGTTTCTGGAAGTAGAAACACCTGTTCTTCAGCCTGAAGCAGGCGGGGCACTTGCACGCCCGTTTATTACCCATC ATCAAGCTTTGAACTGTGATTTTTATATGCGAATAGCTCTGGAACTGCACCTGAAAAGGCTGATAGTGGGCGGTTTTGAC AGGGTGTATGAAATTGGGCGTATTTTCCGTAACGAAGGCATCTCCACCAGGCATAACCCCGAATTTACCATGATGGAAAG CTACCAGGCTTACGCTAACTATAAAGACGTTATGGATTTTCTTGAGGAAATGGTTTCAAGCGTGGTCAAAGAGATTAGCG GTGGATACACCCTGCCGTTTGGAGATATTACCTTGGACTTTACTCCCCCGTGGCCCCGCCTGACCATGCGTGATGCTGTA AAACAATATGCCGGCATAGACTTTTTTGATTTCCCCACCAAAGAAACACTGGCAGCAGAAATGACCCGCCGCAAACTCAA AGTAGATCCCGCCAAAGACTGGGGGAAACTGGTAGATGAGCTGGTAGGTGAATTTGTAGAACCCCACCTTGTTCAACCCA CTTTCCTTACTGACCACCCTGTGGCCATGTCTCCCCTTGCCAAACAGAAACCGGAAGACCCCCGCCTGACAGAGCGGTTT GAGGCCATCTGCGCAAATATGGAAATAGCCAACGCTTTTTCCGAACTGAATGACCCGGTAGAGCAAAGGGCACGTTTTAA AGAACAGCTTGAAAAACGCAGTCAGCTACGCACGGACGAATCTGAAAGCGTGGATGAAGACTTTTTGGCCGCTCTGGCAT ACGGTATGCCGCCCACCGGCGGTCTGGGTGTGGGTATTGACCGTCTGGTGATGCTCTTTACCAACCATGACTCTATCCGC GAGGTTATTCTATTTCCTGCCCTGAAGGACCGGGAAGACACTAAAACACAGGAATAA Protein sequence : MPEEYLNAQKMEKLERIKSRGINPYPSTFHPSHTSAQAVALLVEIETQENHLKEVLKLAGRIMTRRDMGKISFMDIRDGS GKMQIFFRQNDLDEASIELLKDLDLGDFIGVEGSLMRTRTGEPSLAATKVSMLSKSLLPLPEKWHGLQDVEKRYRQRYLD LISNADARQTFLTRSRVISVIRAFMNAKGFLEVETPVLQPEAGGALARPFITHHQALNCDFYMRIALELHLKRLIVGGFD RVYEIGRIFRNEGISTRHNPEFTMMESYQAYANYKDVMDFLEEMVSSVVKEISGGYTLPFGDITLDFTPPWPRLTMRDAV KQYAGIDFFDFPTKETLAAEMTRRKLKVDPAKDWGKLVDELVGEFVEPHLVQPTFLTDHPVAMSPLAKQKPEDPRLTERF EAICANMEIANAFSELNDPVEQRARFKEQLEKRSQLRTDESESVDEDFLAALAYGMPPTGGLGVGIDRLVMLFTNHDSIR EVILFPALKDREDTKTQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-109 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007484986.1 | lysine--tRNA ligase | VFG1668 | Protein | 2e-109 | 47 |
