Gene Information

Name : rplS (btf_313)
Accession : YP_007484763.1
Strain : Dehalococcoides mccartyi BTF08
Genome accession: NC_020387
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 301069 - 301464 bp
Length : 396 bp
Strand : -
Note : -

DNA sequence :
ATGGAAGAGACTATGAATAATCAGGAAGCCCCTGAAACCAGTGAAGAAGAAACAGTTGCTGTAGAAAATACCAAGGCCGA
AAAAGTTTTACCAAATTTTGGCCCCGGTGATACTATAAAAGTACACGCCCGCATTAAAGAAGGCGACAAAGAACGCATTC
AGATGTTCCAGGGTGTAGTCCTGAAGGTCAAACAGGCCGCTGACGGCGGCAATTTCACCGTTCGCCGTATAAGCTACGGC
GTGGGCGTTGAACGCACCTTCCCCTTCCTCTCACCCAATGTTACCAAGGTTGAGATTATGAAGAAGGGCCGAGTACGCCG
TGCCCGCCTGTTCTACCTGCGCAAGCTTTCTGGAAAAGCAGCCCGCATTAAAGAAGTTAAACAGACACCCTCTTAA

Protein sequence :
MEETMNNQEAPETSEEETVAVENTKAEKVLPNFGPGDTIKVHARIKEGDKERIQMFQGVVLKVKQAADGGNFTVRRISYG
VGVERTFPFLSPNVTKVEIMKKGRVRRARLFYLRKLSGKAARIKEVKQTPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 1e-27 59
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 2e-19 44