|
Name : btf_176 (btf_176) Accession : YP_007484627.1 Strain : Dehalococcoides mccartyi BTF08 Genome accession: NC_020387 Putative virulence/resistance : Unknown Product : site-specific recombinase, resolvase family Function : - COG functional category : - COG ID : - EC number : - Position : 180584 - 182233 bp Length : 1650 bp Strand : - Note : - DNA sequence : ATGAGCAATAAGAATGTCACGGTCATACCCGCTAAACCGACAGGGTTCATGCAAGGACTGCCAGGTTTGATAACAAAGCG GAAAGTAGCGGGATATGCCCGTGTTTCAACGGACAAGGATGAGCAGCAAAACAGCTATGAGGCGCAGGTGGAGTACTACA CCGACTACATTAAGCGAAATCCGGAATGGGAATTCGTTGAGGTGTATACCGACGAAGGTATTAGCGGTACCAGCACAAAG CACCGCGAGGGCTTTAAGCGTATGATTGCCGACGCTCTGGATGGTAAAATCGACCTCATCCTCACAAAATCGGTCAGCCG TTTCGCCAGAAATACGGTCGACAGCCTAACCACCATACGACAACTAAAGGATAAAGGCACCGAGGTCTATTTTGAGAAGG AGAACATTTTCACGATGGATTCCAAGGGAGAGTTGCTCCTTACTATCATGTCGAGCCTCGCGCAAGAAGAGTCCCGATCC ATTTCAAAGAACATCACCTGGGGCAAACGCAAGAGCATGGCGGACGGCAAGGTCTCCTTCGCCTACAGTTCTTTTCTCGG CTACGATATGGGTGCTGATGGTCATTTATATATAGTAGAAGACCAGGCGAAAATCGTCCACAGAATCTACGATGAGTTTC TTGCCGGGAAAACCACCTATGACATTGCCGTAAGGCTCACCGAAGACGGTATTCCGACTCCGATGAACAAGGTGAAGTGG CAGGCCTCCACGGTCAGCAACATACTGCAAAATGTTAAATATCGCGGGGATTCCATTTTGCAGCAATATTTTGTGGAGGA TTTTTTAACTAAAAAAATCAAGAAAAACACTGGTGAATTGCCCCTTTACTATGTTAGTCAAAACCATCCGCCAATTATCC CGCCGGAGAAATTTGAGATGGTGCAGGAGGAGTTCCGCAGACGTAAGGAAGGCGGCCCGTACACCTGCATTTCGCCCTTT TCCGGCAGAATCGTATGTGGTAACTGCGGAGGTTTCTACGGCAGAAAGGTATGGCACAGCGGCAGCTCTTACCAGTCTTT CGTCTGGCACTGCAACAATAAATTTACCAAGCGGAAATACTGCTCTACGCCGTCCGTAAAGGAAGACGCCATCATGAAAT GCTTTGTGGATGCTTTCAATAACCTTATAGCGAGAAAGGATGAGATCGCCAGGAACTACGAGGAGTGCCTTGCAGCCATA ACCGATGACAGCGCTTACAAGACCAGACTTGCCGAAGTCGAAAACCTCAGCGCGGGACTTGCTACAAGGATGCATGACAA CCTTACCAGGGAGAGTCGAATGATGGATGACTGCGGCGAGGACAGTCCGATTAAAAAGGAACGTGATGAAATAACCGTCG AGTACGAGGCTTTACAGAAAGAACATAAAGAACTGAACTCCAAGATTGCCCTCTGTGCTGCGAAGAAAGTGCAGGTACGT GGTTTTCTTCAGCTTTTGAAGAAGCAGAAGAAAGCCTTGGTGGAGTTCGACCCGCTCGTATGGCAGGCGGCGGTTCACTA CATGGTCATTAATGAGGACTGCACGGTGAAATTTGTATTCCGCGACGGCACCGAACTGCCCTGGGTGATAGACCCCGGTG TCAAGTCCTATAAGAAGAGAAAGACGGTGGAATCATGCCCACAAGAATAA Protein sequence : MSNKNVTVIPAKPTGFMQGLPGLITKRKVAGYARVSTDKDEQQNSYEAQVEYYTDYIKRNPEWEFVEVYTDEGISGTSTK HREGFKRMIADALDGKIDLILTKSVSRFARNTVDSLTTIRQLKDKGTEVYFEKENIFTMDSKGELLLTIMSSLAQEESRS ISKNITWGKRKSMADGKVSFAYSSFLGYDMGADGHLYIVEDQAKIVHRIYDEFLAGKTTYDIAVRLTEDGIPTPMNKVKW QASTVSNILQNVKYRGDSILQQYFVEDFLTKKIKKNTGELPLYYVSQNHPPIIPPEKFEMVQEEFRRRKEGGPYTCISPF SGRIVCGNCGGFYGRKVWHSGSSYQSFVWHCNNKFTKRKYCSTPSVKEDAIMKCFVDAFNNLIARKDEIARNYEECLAAI TDDSAYKTRLAEVENLSAGLATRMHDNLTRESRMMDDCGEDSPIKKERDEITVEYEALQKEHKELNSKIALCAAKKVQVR GFLQLLKKQKKALVEFDPLVWQAAVHYMVINEDCTVKFVFRDGTELPWVIDPGVKSYKKRKTVESCPQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1713 | YP_003446815.1 | site-specific recombinase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-82 | 47 |
| SSU05_0953 | YP_001198319.1 | DNA recombinase | Not tested | 89K | Protein | 1e-82 | 41 |
| SSU98_0960 | YP_001200518.1 | DNA recombinase | Not tested | 89K | Protein | 1e-82 | 41 |
