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Name : lysS (dcmb_585) Accession : YP_007483554.1 Strain : Dehalococcoides mccartyi DCMB5 Genome accession: NC_020386 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 571604 - 573100 bp Length : 1497 bp Strand : - Note : - DNA sequence : ATGCCGGAAGAATATTTAAACGCTCAAAAGATGGAAAAACTTGAACGGATAAAGAGCCGGGGTATCAACCCTTATCCGTC CACTTTTCATCCCAGCCATACCAGCGCACAGGCAGTTGCTTTGCTGGTTGAGATTGAAACACAGGAAAATCATCTGAAGG AAGTCCTTAAGCTTGCCGGACGGATAATGACCCGCCGTGATATGGGCAAGATTTCCTTTATGGATATACGTGACGGCAGT GGTAAAATGCAGATTTTTTTCCGTCAGAATGACCTTGACGAAGCCAGTATAGAACTGCTTAAAGACTTGGATTTGGGTGA TTTTATCGGGGTAGAGGGTAGCCTGATGCGTACCCGCACTGGTGAGCCCAGTCTGGCTGCTACCAAAGTAAGTATGCTTT CAAAATCACTCCTGCCTCTGCCTGAGAAATGGCACGGCCTGCAGGATGTGGAGAAACGCTACCGCCAGCGTTACCTTGAC CTGATTTCCAACGCAGATGCCCGCCAGACCTTCCTGACCCGCAGCCGGGTTATCAGTGTTATACGTGCCTTTATGAATGC TAAAGGGTTTCTGGAAGTAGAAACACCTGTTCTTCAGCCTGAAGCAGGCGGGGCACTCGCCCGCCCGTTTATTACCCATC ATCAGGCTTTGAACTGTGATTTTTATATGCGAATAGCTCTGGAACTGCACCTGAAAAGGCTGATAGTGGGCGGTTTTGAC CGGGTGTATGAAATTGGGCGTATTTTCCGTAACGAAGGCATCTCCACCAGGCATAACCCCGAATTTACCATGATGGAAAG CTACCAGGCTTACGCTAACTATAAAGACGTTATGGATTTTCTTGAGGAAATGGTTTCAAGCGTGGTCAAAGAGATTAGCG GTGGATACACCCTGCCGTTTGGAGATATTACCCTGGACTTTACTCCCCCGTGGCCCCGCCTGACCATGCGTGATGCTGTA AAACAATATGCCGGCATAGACTTTTTTGATTTCCCCACCAAAGAAACACTGGCAGCAGAAATGACCCGCCGCAAACTCAA AGTAGACCCCGCCAAAGACTGGGGGAAACTGGTAGATGAGCTGGTAGGTGAATTTGTAGAACCCCACCTTGTTCAACCCA CTTTCCTTACTGACCACCCTGTGGCCATGTCTCCCCTTGCCAAACAGAAACCAGAAGACCCCCGCCTGACAGAGCGGTTT GAGGCCATCTGCGCAAATATGGAAATAGCCAACGCTTTTTCCGAACTGAATGACCCGGTAGAGCAAAGGGCACGTTTTAA AGAACAGCTTGAAAAACGCAGTCAGCTACGCACGGACGAATCTGAAAGCGTGGATGAAGACTTTTTGGCCGCTCTGGCAT ACGGTATGCCGCCCACCGGCGGTCTGGGTGTGGGTATTGACCGTCTGGTGATGCTCTTTACCAACCATGACTCTATCCGC GAGGTTATTCTATTTCCTGCCCTGAAGGACCGGGAAGACACTAAAACACAGGAATAA Protein sequence : MPEEYLNAQKMEKLERIKSRGINPYPSTFHPSHTSAQAVALLVEIETQENHLKEVLKLAGRIMTRRDMGKISFMDIRDGS GKMQIFFRQNDLDEASIELLKDLDLGDFIGVEGSLMRTRTGEPSLAATKVSMLSKSLLPLPEKWHGLQDVEKRYRQRYLD LISNADARQTFLTRSRVISVIRAFMNAKGFLEVETPVLQPEAGGALARPFITHHQALNCDFYMRIALELHLKRLIVGGFD RVYEIGRIFRNEGISTRHNPEFTMMESYQAYANYKDVMDFLEEMVSSVVKEISGGYTLPFGDITLDFTPPWPRLTMRDAV KQYAGIDFFDFPTKETLAAEMTRRKLKVDPAKDWGKLVDELVGEFVEPHLVQPTFLTDHPVAMSPLAKQKPEDPRLTERF EAICANMEIANAFSELNDPVEQRARFKEQLEKRSQLRTDESESVDEDFLAALAYGMPPTGGLGVGIDRLVMLFTNHDSIR EVILFPALKDREDTKTQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-109 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007483554.1 | lysine--tRNA ligase | VFG1668 | Protein | 2e-109 | 47 |
