|
Name : serS (dcmb_584) Accession : YP_007483553.1 Strain : Dehalococcoides mccartyi DCMB5 Genome accession: NC_020386 Putative virulence/resistance : Unknown Product : serine--tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 570331 - 571572 bp Length : 1242 bp Strand : - Note : - DNA sequence : ATGCTTGATTTGAAATTTATAAGAGAAAATCCTGAACTGGTACGCAAGGCAGTGGCAGACCGGAATACCGATGCCCCCAT TGATGAAATACTGGAACTGGATAACAGCCGCCGTAACCTCACTCAGGAATTGGATAACCTTCGTGCCAAACGCAAAATAA TGGCCAAACAGAGGGATGAGACCGCCATTGAAGAGGGGCGGGTTTTACGCGGGCAGATAAGTACACTTGAGTCCGAACTT TCACAGGTAGATGAAAAGCTGACTGACCGATTGCTCAGAGTACCCAATATTCCTGACCCGTCTGTGCCTGTTGGTAAAGA TGAAAGCGAAAATGTAGTCCTTTATTACAGGGGAGAAAAACGCAATTTCAGTTTCACTCCCAAACCTCATTGGGAACTGG GTGAAGCCCTGGATATTATAGACTTTGACCGGGGTATCAAACTTTCGGGTTCACGTTTCTATATCTTGAAAGGCGCGGGT GCCCGCCTTCAAAGAGCCCTTATTGCCTTTATGTTAGACCTGCATACCCGAAAACACGATTATACCGAGATCTACCCCCC CTATATGATAAAAAGAGAGTGTCTGGTAGCTTCGGGCAACCTGCCCAAATTTGCTGACAATCTCTATCATGACGCAGAGG AAGACTACTGGTGGGTGCCTACCGCTGAAGCCCCCTTAACCAATCTGCACCGTGATGAAATACTCTCCGCAGAGCAGTTG CCCATTCATTATGTAGCCTACACCGCCTGTTTCCGCCGTGAGAAAATGTCCGCCGGCAAGGATGTACGCGGCATTAAGCG GCTGCATCAGTTTGACAAGGTTGAACTCTATAAATACTGCAAACCGGAAGATTCTTTTGCCGAACTGGAAAAGATGGTGG CAGATGCGGAAGAAATAGCAGACGCCCTCAAAATACCCTACCGCCTTAAACAGCTGGTCACCGCTGATATAAGCTTCGGT TCAGCCAAGTCTTATGATATTGAAATGTATTCACCCGGAGTTGACGAATGGCTGGAGGTTTCATCCTGTTCCAACTGCAC AGACTTTCAGGGCAGGCGGGCTAATGTCCGCTTCCGCCGCACCTCCGAAGCCAAACCCGAATTCGTCCACACCCTGAACG GATCAGGTCTGGCCCTGCCCAGAGTGATGATATCGGTTATAGAAAACTATCAGCAACCGGACGGAAGCATTGTAATTCCT GAAGTACTCCGCCCGTTTATGGGAGTGGACGTTATCCGCTAG Protein sequence : MLDLKFIRENPELVRKAVADRNTDAPIDEILELDNSRRNLTQELDNLRAKRKIMAKQRDETAIEEGRVLRGQISTLESEL SQVDEKLTDRLLRVPNIPDPSVPVGKDESENVVLYYRGEKRNFSFTPKPHWELGEALDIIDFDRGIKLSGSRFYILKGAG ARLQRALIAFMLDLHTRKHDYTEIYPPYMIKRECLVASGNLPKFADNLYHDAEEDYWWVPTAEAPLTNLHRDEILSAEQL PIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELYKYCKPEDSFAELEKMVADAEEIADALKIPYRLKQLVTADISFG SAKSYDIEMYSPGVDEWLEVSSCSNCTDFQGRRANVRFRRTSEAKPEFVHTLNGSGLALPRVMISVIENYQQPDGSIVIP EVLRPFMGVDVIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-93 | 46 |
