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Name : clpC (dcmb_55) Accession : YP_007483031.1 Strain : Dehalococcoides mccartyi DCMB5 Genome accession: NC_020386 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit ClpC Function : - COG functional category : - COG ID : - EC number : - Position : 51247 - 53721 bp Length : 2475 bp Strand : + Note : - DNA sequence : ATGTCTAACAGATTTGATAAATTTTCCGAAAGAGCGCGCCGGGTTCTTACCTATGCACAGGAAAAAGCCCAGAGCCTTAA CCATAACTACATCGGCACTGAGCATATACTGCTGGGGCTGGTGAGAGAAGAAGAAGGCGTGGCCGCCCGGGTGCTGGTGA ATATGGACGTAAACCTGGCCAAGGTACGTTCGGCTGTTGAATTTATACTGGGACGGGGTGAACACCCTGCTACCTCTGAA ACCGGCCTTACCTCCAGAGCCAAAAAGGTAATAGAGCTGGGTATTGATGAAGCCAGAAATCTGGGCCATAACTACATTGG CACTGAGCATTTGCTTTTAGGCCTTCTGCGTGAAGGTGAAGGGGCGGCTGCCGGTGTGCTTGAGAGTTTTGGGGTTACAG TTGAAAAGGTGCGCACCGAAGTAGGGCGTATCTTGAATCAGGGTTTAAACAAACCTAAAACCAGCCGGACAACCCCCAGC CGAACCCCCCAGCTGGACCAGTTAGGTTTTGACCTGACGGCCGCAGCCAAGGCTGGTAAGCTTGACCCGGTTATCGGGCG TTCCAAAGAAATAGAACGGGTAGTCCAGATTCTTTCCCGCCGTACCAAAAATAACCCTGCTCTTATAGGCGAACCTGGCG TAGGAAAAACCTCCATTGTGGAGGGGCTGGCCCAGCGCATTGTTTCGGGTGACGTACCGGAAACTCTGGAACAGAAGCAT ATAATCTCACTGGACGTGGCCTCACTGGTGGCCGGTACCAAATACCGGGGTGAATTTGAGGAACGGCTTAAGAAGGTTAT TGAAGAGATTAAAAATGCAGGAAACATAATCCTGTTTATAGACGAATTCCACACCATGGTGGGAGCCGGTGCTGCCGAGG GGGCAGTAGATGCCGCCAATATCCTCAAGCCTTCACTGGCCAGAGGTGAGGTGCAGGTTATCGGTGCGACCACTCTGGAT GATTTCCGTAAGTATGTTGAGCGTGATGCCGCACTTGAGAGACGCTTCCAGCCGGTACTGGTTGAAGAACCGGCCATAGA AGATACACTGAGCATTCTCAGGGGTATAAAAGAACGCTATGAGGAGCATCATAAGCTTATCATCAGCGATGAAGCTATTA TCGCTGCTGCCAATATGGCTGCCAGATATATACCTGACCGCTTTTTGCCGGACAAGGCTATAGATTTGGTTGACGAAGCT GCATCACGGGTGCGGATAAAGAAACGCACCAAGCCGGTCTCTTTGAAAGAGATGAAAGCTATAGAAGACAGCTACCGCCG GGATAAAGAAGCCGCTCTGGCTACCCAGCAGTACGACTATGCTTCCGAACTCCGCGAGCGTGAGCTTCAGATAGCTGAAA AGATACGCCGCATGGAAGATGAATGGCAGACCGAACAGGCTATGGACAAGCCGGTGGTGGGCGAAGAAGATATTGCTCAG GTAGTCAGTATGTGGACAGGTGTCCCTCTGGTACAGCTTACCGGTGACGAAACCGAACGCCTTCTCCATATGGAAGATGC TTTGCACGAGCGGATTATCGGCCAGGAAGAGGCTATTGTTACCATATCCAAGGCTGTCAGGCGGGCACGGGCCGGTCTTA AAGATCCCCGTCACCCCATTGGCAACTTTGTTTTCCTTGGACCTACCGGCGTGGGTAAAACCGAATTGGCACGGGCGCTT GCCCAGTTTATGTTCGGTTCGGAAGACTCTTTGGTTCGGCTGGATATGTCCGAATTTATGGAAAAATTCGCTGTATCCCG TCTGGTGGGTGCACCCCCCGGATATGTGGGCTATGATGAGGGCGGCCAGCTGACGGAAGCTGTTCGCCGCAAGTCATATT GCCTGATACTGCTGGACGAAATAGAAAAAGCTCATCCTGACGTTTTTAATATTCTCCTTCAGATATTTGATGATGGCCAC CTGACAGATGCCAAGGGCAGGCGGGTGGACTTCAGGAATACCATTATCATCATGACCTCAAACATTGGGGCTGAACTTAT CCGCAAGGGTAGCGGGACTATCGGATTTGCCACCCAGACAGACGAATCAAAGGCCCAGCAGACCAATTTTGAGCACATGA AAGACAAGCTGCTGGGTGAGCTTAAAAAGAGTTTCCGTCCGGAGTTTTTAAACCGTATTGACAGTGTGGTGGTCTTCCAC TCGCTAAATAAAGAGCAGATTCGCAGTATTGTTGACCTGATGCTCAAGAGTGTGGTCAAGCAGATGGCTGAAAAGGGCAT CGGGCTTGAGGTGACCGAATCTGCCAAGGACTTGCTGGGCAAGAAGGGTTATGATGAGGTTTATGGTGCCAGGCCTCTGC GCCGCACTATCCAGACCATGATAGAAGACCGCTTGTCTGAAGACTTGCTGAGGGCTAAATTTAAAGCCGGGGATAAAGTA ATAGTGGATACTGCCGAAGACGAAATAATTGTCCGGCTGGCCGAACCGGCTGAGCTTAGTCAGGCTACTCCTTAA Protein sequence : MSNRFDKFSERARRVLTYAQEKAQSLNHNYIGTEHILLGLVREEEGVAARVLVNMDVNLAKVRSAVEFILGRGEHPATSE TGLTSRAKKVIELGIDEARNLGHNYIGTEHLLLGLLREGEGAAAGVLESFGVTVEKVRTEVGRILNQGLNKPKTSRTTPS RTPQLDQLGFDLTAAAKAGKLDPVIGRSKEIERVVQILSRRTKNNPALIGEPGVGKTSIVEGLAQRIVSGDVPETLEQKH IISLDVASLVAGTKYRGEFEERLKKVIEEIKNAGNIILFIDEFHTMVGAGAAEGAVDAANILKPSLARGEVQVIGATTLD DFRKYVERDAALERRFQPVLVEEPAIEDTLSILRGIKERYEEHHKLIISDEAIIAAANMAARYIPDRFLPDKAIDLVDEA ASRVRIKKRTKPVSLKEMKAIEDSYRRDKEAALATQQYDYASELRERELQIAEKIRRMEDEWQTEQAMDKPVVGEEDIAQ VVSMWTGVPLVQLTGDETERLLHMEDALHERIIGQEEAIVTISKAVRRARAGLKDPRHPIGNFVFLGPTGVGKTELARAL AQFMFGSEDSLVRLDMSEFMEKFAVSRLVGAPPGYVGYDEGGQLTEAVRRKSYCLILLDEIEKAHPDVFNILLQIFDDGH LTDAKGRRVDFRNTIIIMTSNIGAELIRKGSGTIGFATQTDESKAQQTNFEHMKDKLLGELKKSFRPEFLNRIDSVVVFH SLNKEQIRSIVDLMLKSVVKQMAEKGIGLEVTESAKDLLGKKGYDEVYGARPLRRTIQTMIEDRLSEDLLRAKFKAGDKV IVDTAEDEIIVRLAEPAELSQATP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_007483031.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 57 |
| clpC | YP_007483031.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0080 | Protein | 2e-148 | 50 |
