Gene Information

Name : phoB (dcmb_158)
Accession : YP_007483133.1
Strain : Dehalococcoides mccartyi DCMB5
Genome accession: NC_020386
Putative virulence/resistance : Virulence
Product : phosphate regulon transcriptional regulatory protein PhoB (SphR)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 171269 - 171961 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence : 
ATGCCTGAGCATAAAATATTGGTAGTTGAAGATGATGCCACTCTGCGGGAACTTTTGTGTTATAACCTTGCCAAAGAAGG
GTATCAGCTGGAATGTGCTGAAGACGGGCTGAAGGCACTTAGTGTTTACCGCCTGTTTAAGCCGGCACTGGTTATACTGG
ATGTTATGATACCGGGTATAGACGGCTTTGAACTCTGCCGCCTTATCCGCGCCGAGAGCAGTGTTCCCATACTTATGCTG
ACTGCCCGTTCAAGTGAGGCGGACAAAGTAAACGGGCTGGAAGCGGGGGCGGATGATTATCTGTCCAAACCCTTTGGCAT
GAAGGAACTGCTGGCCAGAATGAAAGCTCTCCTTCGCCGCAGCCAGATGCAGAACTCCCCGGCAGAGCCGGCAGGCGGGC
TGAAGATAGGCGATTTGGAGATATTTATTGAACGCCATCTGGTAATACGGAACGGAGTTGCTCTGGATTTTTCCCCGAAA
GAATTTGACCTGTTTAGCTTTTTAGTGCAGAACCGCTATCGGGTTTTCAGCCGGGAACAACTGCTGGAAAAGGTCTGGGG
TTATGACTATCCCGGCGGTACCCGTACGGTGGATGTGCATATAAGCTGGCTTCGCCAGAAGATAGAGGCTGATCCCTCCA
AACCCCGCCACCTGATAACTGTCAGGGGAACCGGCTACAAGTTTGAGGAGTAG

Protein sequence : 
MPEHKILVVEDDATLRELLCYNLAKEGYQLECAEDGLKALSVYRLFKPALVILDVMIPGIDGFELCRLIRAESSVPILML
TARSSEADKVNGLEAGADDYLSKPFGMKELLARMKALLRRSQMQNSPAEPAGGLKIGDLEIFIERHLVIRNGVALDFSPK
EFDLFSFLVQNRYRVFSREQLLEKVWGYDYPGGTRTVDVHISWLRQKIEADPSKPRHLITVRGTGYKFEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 5e-35 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 6e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_012469.1.7685629. Protein 3e-47 48
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) AE000516.2.gene3505. Protein 7e-47 48
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) HE999704.1.gene2815. Protein 5e-48 47
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_002952.2859905.p0 Protein 1e-47 46
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_002745.1124361.p0 Protein 1e-47 46
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_009782.5559369.p0 Protein 1e-47 46
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_002951.3237708.p0 Protein 1e-47 46
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_007622.3794472.p0 Protein 1e-47 46
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_002758.1121668.p0 Protein 1e-47 46
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_003923.1003749.p0 Protein 8e-48 46
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_009641.5332272.p0 Protein 1e-47 46
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_013450.8614421.p0 Protein 1e-47 46
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_007793.3914279.p0 Protein 1e-47 46
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) AE016830.1.gene1681. Protein 9e-48 45
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_012469.1.7686381. Protein 8e-44 43
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) AE015929.1.gene1106. Protein 3e-30 42
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) AF155139.2.orf0.gene Protein 9e-39 41
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) FJ349556.1.orf0.gene Protein 2e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) VFG1389 Protein 4e-35 45
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) VFG1390 Protein 1e-41 43
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) VFG1563 Protein 3e-35 43
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) VFG1702 Protein 2e-35 43
phoB YP_007483133.1 phosphate regulon transcriptional regulatory protein PhoB (SphR) VFG1386 Protein 1e-35 41