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Name : dcmb_1271 (dcmb_1271) Accession : YP_007484211.1 Strain : Dehalococcoides mccartyi DCMB5 Genome accession: NC_020386 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit ClpC Function : - COG functional category : - COG ID : - EC number : - Position : 1205121 - 1207559 bp Length : 2439 bp Strand : + Note : - DNA sequence : ATGAGACAGGAAAAATTTACCGAACAAGCCCAGGAAGCCCTCAGCGCTTCACAGATGCTGGTACAGGAATATCAGCACAG CCAATGGGATGTTGAACATGTACTGCTGGCTCTTGTCCGTCAGGAAAAAGGGCTGGTGGGTGAAATAATCAAAGAGCTGA AACTAAGCTCCGAGGAAATAACCAAACAGCTGGTAGAGGCTTTGAAACGTTCGCCTAAAGCAGTAGGCGGCAATGTTCAG ATATACCCCACCCCCCGCATTATCAGCCTGCTGCAAACCGCCAACAACGAAGCAGACCGCCTGCGGGATGAATTCATAGG CACGGAACATCTGCTGGTAGCTATAGCAGGAGATACCCAGGGAGAATCTGCCCGCATCCTGAAGCATTTTGGTATTGATC AGGAAAAAGTCTATTCCGCCCTCCAGAAAATAAGGGGCGGACACCGGGTGACTGATGCCAGAGCCGAAAGCAAATACAGG GCACTGGCCAAATACAGCCGTGACCTTACCGAACTGGCTAAACAGGGCAAGATAGACCCGGTAATAGGCCGTGATCAGGA AATCCGCCGGGTTATGCAGATACTCTCCCGCCGCACCAAGAACAACCCTGTGATAGTGGGTGAAGCAGGTGTAGGCAAAA CTGCCATTGCCGAAGGGGTTGCCCAAAAAATTGCGGATAACGACGTACCCGAATCCCTGCGTGACCGCAAGGTAATGGCA CTGGATATGGGTGCATTGGTTGCCGGAAGCAAGTTCCGGGGGGAGTTTGAAGAACGCCTCAAAGCCGTAATGGACGAAGT GCGCCAATCTGCCGGTGAAATTATTTTGTTTATAGATGAAATCCATACCGTAGTCGGGGCAGGGGCAGCCGAGGGGGCTA TTGATGCCTCAAACATGCTGAAGCCGGCCTTATCCAGGGGTGAACTCCAGACTATTGGGGCTACCACTCTGGATGACTAC CGCAAATATATTGAAAAAGACACCGCTCTGGAGCGCCGCTTCCAGCCGGTATATGTGGAAGAACCTACAGTGGAACAAAC TATTGAGATACTAAAGGGTATCAGACCCAAGTACGAAACCCACCACAAGCTGAAGATAAGTGACGCCGCTCTGGAGGCAG CCGTCAGGCTGTCCAGCCGTTACATAACTGAACGCCAACTGCCCGATAAGGCTATAGACCTTATTGACGAAGCCGCAAGC AAACTCCGTCTGGATAGCGAAAGCGCCCCGCCGGAAGTAAAGAAGCTGGAAAATGAATTTCGTCAGGCAGGCATTGAGGA AGAAGCCGCTTCCCAACTGCAGGATTATGAAAAAGCGGCTGAACTCAAGGCTGAAAAAATACGCTTGGAAGAAAAGTTCA ACACTGCCCGTGAGGAATGGCTGAAACAGGAGAAAATAGCCGAAGAAGTAACTGACAAACAGATAACCGAGCTGGTTTCC TCTATGACCGGCATACCTGTCAGCCAGATGCTTGAAGGCGAGGCTTCCAAACTGCTGAATATGGAAGAGCGTATCCACGA GCGGATGGTAGACCAGGAAGAAGCTGTAAAAGCCGTTGCCGAAGCTATCCGCCGCAGCAGGGCAGGTCTCAAAGACCCGC GCCGCCCTATAGGCAGTTTCCTGTTTTTAGGCCCGACCGGGGTGGGCAAAACAGAACTGGCCCGAAGTCTGGCCTGGTTT TTGTTTGACGATGAAACCGCCATGGTAAGGCTGGATATGTCCGAATATCAGGAAAAGCACACCGTATCCCGTCTGGTGGG GGCACCTCCCGGATATGTGGGCTACGATGAAGGCGGGCAACTAACCGAATTGGTTCGCCGCCGCCCTTATCGGGTTATCC TGCTGGATGAAATTGAAAAAGCCCATCCAGATGTCTACAATTCCTTGCTCCAGCTACTGGATGACGGCCGTCTGACAGAC GGGCAGGGCAGAACAGTGGACTTTAAAAATACGGTCATTATAATGACCTCTAACGCAGGCATAGAAACCATAAAACGCGA ATCTGCTCTGGGTTTCGCAGTCAGAACCGATGACACCAAAACCCGCCATGACAGCTATGAACGCATGAAAGACAAGGTCA TGACCGAAGTCAAAAAGACCTTCCGCCCGGAGTTCATCAACCGGGTAGATGAAATAATTGTCTTCCACGAGCTGGCAGAG GAACAGATACGCCAGATAGTAGATTTCATGATAAAAGACGTTTCCAAACGTCTTGAGGAACGCAAACTCAAACTGGAGCT GACCGACGAGGCTAAGGGCTGGCTGGCCAAGGTGGGTTATGACCCGGCTTTCGGTGCCAGACCACTTCGCAGAGCCATTG AAAGATACGTGGAAAGCCCGCTGGCGGGCAAGCTGCTTCGCAATGAGTTTAGTGAAAATGCTACAATACTGGTGGACAAG GCGGATGAAGCTTTGAGTTTTAGCCAAAAGGCCGCCTGA Protein sequence : MRQEKFTEQAQEALSASQMLVQEYQHSQWDVEHVLLALVRQEKGLVGEIIKELKLSSEEITKQLVEALKRSPKAVGGNVQ IYPTPRIISLLQTANNEADRLRDEFIGTEHLLVAIAGDTQGESARILKHFGIDQEKVYSALQKIRGGHRVTDARAESKYR ALAKYSRDLTELAKQGKIDPVIGRDQEIRRVMQILSRRTKNNPVIVGEAGVGKTAIAEGVAQKIADNDVPESLRDRKVMA LDMGALVAGSKFRGEFEERLKAVMDEVRQSAGEIILFIDEIHTVVGAGAAEGAIDASNMLKPALSRGELQTIGATTLDDY RKYIEKDTALERRFQPVYVEEPTVEQTIEILKGIRPKYETHHKLKISDAALEAAVRLSSRYITERQLPDKAIDLIDEAAS KLRLDSESAPPEVKKLENEFRQAGIEEEAASQLQDYEKAAELKAEKIRLEEKFNTAREEWLKQEKIAEEVTDKQITELVS SMTGIPVSQMLEGEASKLLNMEERIHERMVDQEEAVKAVAEAIRRSRAGLKDPRRPIGSFLFLGPTGVGKTELARSLAWF LFDDETAMVRLDMSEYQEKHTVSRLVGAPPGYVGYDEGGQLTELVRRRPYRVILLDEIEKAHPDVYNSLLQLLDDGRLTD GQGRTVDFKNTVIIMTSNAGIETIKRESALGFAVRTDDTKTRHDSYERMKDKVMTEVKKTFRPEFINRVDEIIVFHELAE EQIRQIVDFMIKDVSKRLEERKLKLELTDEAKGWLAKVGYDPAFGARPLRRAIERYVESPLAGKLLRNEFSENATILVDK ADEALSFSQKAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| dcmb_1271 | YP_007484211.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 55 |
| dcmb_1271 | YP_007484211.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0080 | Protein | 7e-155 | 50 |
