Gene Information

Name : dcmb_1197 (dcmb_1197)
Accession : YP_007484138.1
Strain : Dehalococcoides mccartyi DCMB5
Genome accession: NC_020386
Putative virulence/resistance : Virulence
Product : HTH domain-containing protein, XRE family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1133484 - 1133693 bp
Length : 210 bp
Strand : +
Note : -

DNA sequence :
ATGCAAAATAAACTTAAGGTGTTAAGAGCTATAAACAGCCTCACTCAGGAAGAACTGGCAGACAAACTGGGCATTACCCG
CCAGACAGTTATTTCTATAGAACGGGGTAAGTATTCCCCTTCTCTGGAGCTGGCTTTCAAAATAGCCTCCCTTTTTGAAA
CACCTATAGAAGAAATATTTGTATATAACACTGAACAGGAAGGGCAATGA

Protein sequence :
MQNKLKVLRAINSLTQEELADKLGITRQTVISIERGKYSPSLELAFKIASLFETPIEEIFVYNTEQEGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-10 48
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-10 48
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-10 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
dcmb_1197 YP_007484138.1 HTH domain-containing protein, XRE family VFG2175 Protein 1e-10 48
dcmb_1197 YP_007484138.1 HTH domain-containing protein, XRE family VFG2168 Protein 1e-10 48