Gene Information

Name : H175_16p01 (H175_16p01)
Accession : YP_007482116.1
Strain :
Genome accession: NC_020380
Putative virulence/resistance : Unknown
Product : TnpA transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 164 - 2302 bp
Length : 2139 bp
Strand : +
Note : -

DNA sequence : 
ATGTTAGTCTCATTTTTATTGGAGATTACACAAGACCTTATAGATTACGCAATTGAAATTCATGATCGTCTTATGATGAA
TCTTCAAACAAAAGGGAAAAAAGAACAAGACGAAATACAGCAAGCAAATGGGAAAAAATTAAACGAGAAGATTTTACAAT
TTATTACTGTATGCGGGACACTAATTGAGGCAAAAGAAACGGGTAAAGATGCTTTTGCAGCCCTAGATGAAGTAATGTCA
TGGAATGAGATGGTCGAATCTGTTGAAGAAGCAAAACAACTATCACGGCCTTTAAATTATGACTATTTGGATTTGTTAAA
TACTCGTTATTCCTATGTTAGACGATATGCACCTACTTTATTACGCAGTCTTCATTTTAGAGCGACGAAATCTGGAGAAC
CCGTTTTACAAGCACTTGATACGATTCATGAATTGAATGAAACAGGTAAACGAAAAGTGCCTCATGGCGCTCCCTTACAC
TTTGTATCTAACCGTTGGCAAAAACATGTATATGATGATGACGGAAACATTAATCGGCACTATTATGAATTGGCAGCTTT
AACCGAGTTAAGAAATCATATTCGTTCAGGAGATATTTTTGTATCAGGCAGTAGACATCATAAGGCATTTGATGATTATC
TTATACCGTATGATGAATGGAACGAAGTTTCAAACATTCCAAATGGCCTTACAGCCCCTTTAAAAGCTGAAGATTATATA
ACTGACCGAATAAACCGATTAAATGAACATTTAGAATGGTTATCAAAAAATAGCGAGAAATTAGAAGGAGTAGATATTAG
TCAAGGAAAACTACATGTTGAGCGATTGGATAGAGGAACTCCAGAAGAAGCAAAAGCATTTAGTAAACTTCTTCATAGTA
TGTTACCCAGAATAAAACTGACAGATTTACTAATAGAAGTGGCCAGTTGGACTGGATTTCATGATCAATTTATCCACGCC
TCTACCAATCAATCTCCTGATCAAGAGGAACAGAATATTGTATTAGCTACTTTGATGGCAATGGGGACAAATATAGGTCT
TACAAAAATGGCGGAAGCTACCCCTGGAATCTCCTATAGACAAATGGCAAATGCTTCACAATGGAGAATGTATGATGATG
CAATGGTTCGCGCTCAATCTATTCTCGTGAATTTCCAAAAGGAACAAAAGTTATCATCCTATTGGGGAGATGGGACAACT
TCTTCTTCTGATGGTATGCGTTTATCCATTGCTGTACGTTCTCTACATGCAGATTCCAATCCACACTATGGAACGGGAAA
AGGTGGAACCATTTATCGATTTGTAAGTGATCAGCTATCTGCCTATCATGTGAAAGTCATTACTACCAATGCACGAGATG
CTCTTCATGTATTAGATGGGCTTCTTCATCATGAAACAGATTTAAAAATTGAAGAACATTACACAGATACAGCTGGATAT
ACAGATCAAGTTTTCGCTTTAACACACTTGTTGGGATTTCGATTTGCTCCTCGTATTCGTGATTTGGCAGATACTAAGCT
TTTTTCTATACCTGGTGGAGAAGAATATGAAAATGTTCAAGCACTTTTAAAAGGAAAAATTAATGTAAAGTTAATAAAAG
AAAACTATGAAGATATTAGAAGGTTGGCATACTCGGTTCAAACAGGAAAAGTATCTAGCGCTCTTATCATGGGGAAGCTC
GGATCATATGCAAGACAAAATAAACTCGCAACAGCACTTGGAGAAATGGGACGAATCGAGAAAACCCTCTTTACGCTGGA
TTACATATCTAATAAAGCCGTAAGGAGACGGGTTCAAAAAGGTTTAAATAAAGGAGAAGCAATCAATGCATTAGCTAGAA
TTATATTTTTTGGACAACGTGGAGAATTTAGAGAACGTGCTCTCCAAGACCAGTTACAAAGAGCTAGTGCACTAAACATA
ATTATTAACGCTATAAGTGTGTGGAACACTGTATATATGGAAAAAGCCGTAGAAGAATTAAAAGCAAGAGGAGAATTTAG
AGAAGATTTAATGCCATATGCGTGGCCGTTAGGATGGGAACATATCAATTTTCTTGGAGAATACAAATTTGAAGGATTAC
ATGACACTGGGCAAATGAATTTACGTCCTTTACGTATAAAAGAGCCGTTTTATTCTTAA

Protein sequence : 
MLVSFLLEITQDLIDYAIEIHDRLMMNLQTKGKKEQDEIQQANGKKLNEKILQFITVCGTLIEAKETGKDAFAALDEVMS
WNEMVESVEEAKQLSRPLNYDYLDLLNTRYSYVRRYAPTLLRSLHFRATKSGEPVLQALDTIHELNETGKRKVPHGAPLH
FVSNRWQKHVYDDDGNINRHYYELAALTELRNHIRSGDIFVSGSRHHKAFDDYLIPYDEWNEVSNIPNGLTAPLKAEDYI
TDRINRLNEHLEWLSKNSEKLEGVDISQGKLHVERLDRGTPEEAKAFSKLLHSMLPRIKLTDLLIEVASWTGFHDQFIHA
STNQSPDQEEQNIVLATLMAMGTNIGLTKMAEATPGISYRQMANASQWRMYDDAMVRAQSILVNFQKEQKLSSYWGDGTT
SSSDGMRLSIAVRSLHADSNPHYGTGKGGTIYRFVSDQLSAYHVKVITTNARDALHVLDGLLHHETDLKIEEHYTDTAGY
TDQVFALTHLLGFRFAPRIRDLADTKLFSIPGGEEYENVQALLKGKINVKLIKENYEDIRRLAYSVQTGKVSSALIMGKL
GSYARQNKLATALGEMGRIEKTLFTLDYISNKAVRRRVQKGLNKGEAINALARIIFFGQRGEFRERALQDQLQRASALNI
IINAISVWNTVYMEKAVEELKARGEFREDLMPYAWPLGWEHINFLGEYKFEGLHDTGQMNLRPLRIKEPFYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA CAJ77068.1 Transposase Not tested AbaR1 Protein 9e-117 44
EC042_4089 YP_006098372.1 transposase Not tested Tn2411 Protein 4e-142 44
tnpA AGK07029.1 transposase Not tested SGI1 Protein 1e-114 43
tnpA AGK07087.1 transposase Not tested SGI1 Protein 1e-114 43
tnpA ACF06153.1 transposase Not tested Tn5036-like Protein 8e-141 43
tnpA AAL08440.1 transposase TnpA Not tested SRL Protein 1e-137 42
tnpA ACY75538.1 TnpA Not tested Tn6060 Protein 4e-138 42
EXA24 ABD94633.1 truncated Tn1721 tranposase Not tested ExoU island A Protein 5e-138 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H175_16p01 YP_007482116.1 TnpA transposase VFG1031 Protein 8e-138 42