Gene Information

Name : H175_ch5231 (H175_ch5231)
Accession : YP_007481688.1
Strain : Bacillus thuringiensis IS5056
Genome accession: NC_020376
Putative virulence/resistance : Virulence
Product : Thiol-activated cytolysin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5090574 - 5092112 bp
Length : 1539 bp
Strand : -
Note : -

DNA sequence :
GTGATTTTTCTGAATATTAAGAAAAACACTAAAAGAAGAAAGTTCCTTGCATGTTTATTAGTTAGTCTATGCACTATTAA
TTATTCATCTATTTCCTTCGCAGAAACACAAGCAAGTAATGCAACTGATGTAACCAAAAATGCTAGTGGCATTGATACTG
GTATAGCAAATCTTAAATATAATAATCAAGAGGTTTTAGCTGTAAATGGTGATAAAGTAGAAAGTTTTGTTCCGAAAGAA
AGTATCAATTCAAATGGTAAATTTGTAGTAGTGGAACGCGAGAAAAAATCACTTACAACGTCACCAGTCGATATTTCAAT
TATTGATTCTGTGGTGAATCGCACGTATCCAGGAGCTGTACAACTTGCTAATAAAGCTTTTGCAGACAATCAACCGAGTT
TATTAGTGGCTAAGAGAAAGCCTTTGAATATTAGTATAGACTTACCGGGCATGAGAAAAGAAAATACAATCACTGTCCAA
AATCCGACATATGGTAATGTAGCTGGAGCAGTAGACGATTTAGTATCTACTTGGAATGAAAAGTATTCTACAACACATAC
GTTACCTGCAAGAATGCAGTATACGGAATCTATGGTTTATAGTAAATCACAAATTGCAAGTGCTCTTAATGTTAACGCTA
AATATCTTGATAACAGTCTAAATATTGATTTTAATGCGGTTGCAAATGGAGAGAAAAAAGTGATGGTAGCGGCGTATAAG
CAAATATTTTATACGGTAAGTGCTGAACTACCTAACAATCCATCCGACCTTTTTGATAATAGCGTTACTTTTGACGAGTT
AACTCGAAAAGGCGTAAATAATTCGGCTCCACCTGTTATGGTTTCAAATGTAGCTTATGGTAGAACGATTTATGTAAAAT
TAGAAACAACATCTAAGAGCAAAGATGTACAAGCTGCTTTTAAAGCCTTACTTAAGAATAACAGCGTTGAAACAAGTGGA
CAGTATAAAGATATTTTTGAAGAAAGTACCTTTACTGCTGTAGTATTAGGCGGAGATGCGAAAGAACATAACAAGGTTGT
TACTAAAGATTTCAATGAAATCCGAAATATTATTAAAGATAATGCTGAATTAAGTCTTAAAAATCCAGCATACCCAATTT
CATATACAAGTACTTTCTTAAAAGATAATGCAACTGCTGCTGTTCATAACAATACAGATTATATTGAGACGACAACTACA
GAATATTCAAGTGCTAAAATGACACTTGATCATTACGGTGCTTACGTTGCTCAATTTGATGTATCTTGGGATGAATTCAC
ATTTGATCAAAAGGGTAACGAAGTACTAACACATAAAACGTGGGATGGTAGTGGAAAAGACAAAACGGCTCATTACTCTA
CAGTTATCCCTCTTCCACCGAATTCAAAAAATATAAAAATTGTAGCAAGAGAATGTACAGGTCTTGCATGGGAATGGTGG
AGAACAATTATTAATGAACAAAACGTTCCATTAACAAATGAAATAAAAGTTTCAATTGGAGGAACAACATTATACCCAAC
AGCTAGTATTAGTCATTAA

Protein sequence :
MIFLNIKKNTKRRKFLACLLVSLCTINYSSISFAETQASNATDVTKNASGIDTGIANLKYNNQEVLAVNGDKVESFVPKE
SINSNGKFVVVEREKKSLTTSPVDISIIDSVVNRTYPGAVQLANKAFADNQPSLLVAKRKPLNISIDLPGMRKENTITVQ
NPTYGNVAGAVDDLVSTWNEKYSTTHTLPARMQYTESMVYSKSQIASALNVNAKYLDNSLNIDFNAVANGEKKVMVAAYK
QIFYTVSAELPNNPSDLFDNSVTFDELTRKGVNNSAPPVMVSNVAYGRTIYVKLETTSKSKDVQAAFKALLKNNSVETSG
QYKDIFEESTFTAVVLGGDAKEHNKVVTKDFNEIRNIIKDNAELSLKNPAYPISYTSTFLKDNATAAVHNNTDYIETTTT
EYSSAKMTLDHYGAYVAQFDVSWDEFTFDQKGNEVLTHKTWDGSGKDKTAHYSTVIPLPPNSKNIKIVARECTGLAWEWW
RTIINEQNVPLTNEIKVSIGGTTLYPTASISH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
slo YP_281505.1 streptolysin O Virulence Not named Protein 4e-151 63
hly AAA69525.1 listeriolysin O Virulence LIPI-1 Protein 3e-101 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H175_ch5231 YP_007481688.1 Thiol-activated cytolysin VFG2275 Protein 3e-175 71
H175_ch5231 YP_007481688.1 Thiol-activated cytolysin VFG0976 Protein 1e-151 63
H175_ch5231 YP_007481688.1 Thiol-activated cytolysin VFG0074 Protein 3e-101 43
H175_ch5231 YP_007481688.1 Thiol-activated cytolysin VFG1363 Protein 2e-101 42