Gene Information

Name : H175_ch4006 (H175_ch4006)
Accession : YP_007480466.1
Strain : Bacillus thuringiensis IS5056
Genome accession: NC_020376
Putative virulence/resistance : Unknown
Product : Retron-type RNA-directed DNA polymerase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.49
Position : 3963832 - 3965664 bp
Length : 1833 bp
Strand : -
Note : -

DNA sequence :
ATGTTAAAGAAAACTAAACTAAGGCACAGTGAATATTACGACATGCAAAGAAAGTATGATGAGTTATATTCTAATAGCCT
TAATGGTAACAATTTCTATAAATTAATTGATATTATCGGTTCGGAAGAAAATATTAGATTAGCATACCGCAACATCAAAA
CTAATAAGGGGAGTAACACGGCTGGAGTTGACAATTTAACCATTAAAGATATTTGGCACCTAAACGATACAAAGATTATT
CATGAAGTTAGAAAACGATTAAATAACTATCAACCACAAGCAGTTAAAAGAGTCCTTATCCCAAAAGAGGGCAGTGATAA
GAAGCGACCCCTGGGGATTCCAACAATTTGGGACAGATTAGTACAACAATCTATCCTCCAAGTATTGGAACCTATTTGTG
AAGCTAAGTTTCATAACCATAGTTATGGATTTAGACCGAACAGAAGTACACACCATGCACTAAGTAGAGTTGTAAGTCTT
ATTAACATAGGTCACCAACACTACTGTGTTGATATTGACATTAAGGGGTTCTTTGATAATGTATGCCACAAAAAGCTATT
AAGGCAAATGTGGACTCTGGGAATAAGAGACAAATCACTTCTATGTGTTATTTCAAAAATCCTTAAATCTGAGATAGAAG
GAGAGGGTATTCCCAATAAGGGTACTCCGCAAGGAGGAATTATTTCTCCTTTACTTTCCAACATTGTTCTAAATGAACTT
GATTGGTGGATAAGTAGCCAATGGGAAACCTACAAACCTCACAGAATCTCTACTCGGCATTTAGGGTTTCGACAATATGC
TAGGAAGTACACGAATCTAAAATGTGGTTATGTAGTGAGATACGCGGATGACTTCAAAATAATGTGTCGGACTTATGATG
AAGCACAACGCTTTTATCATGCGACAGTTGATTTTCTCAAATCCCGCTTGGGATTAGAAATTAACCCCAAAAAGTCCAAA
GTGGTTAATCTCAAGAAAAACTCGTCAGTTTTCCTTGGATTCAAAATCAAAGTGGTTAAACAAGGTAAAGCTAAATTTGG
ATATATTGCAAAAACCAGTATGTCCGACAAAGCTATTACAAAAGCTAAAAGACAACTAAAAGAACGAATCAAAGGAATTC
AAAAGGAGCCGACTTCAGAGAAAGTTACTCAATTTAATTCAACCCTTCTTGGTATACAAAATTACTTTAAATATGCGGTT
ACAATTTACATGGATTTAACGGAGGTAAATTACTCTCTGCGAAGAGTCATAAGAACCAGACTTAGAAACAATATGAAGCA
CATGAAGTTCTGTGAAACATCTGTGAATTTTAAAAGGAAGACCAAAGGAATACAACCCAACACTAAGATTTACGCTGTAC
AGAACACTCCACTCTTACCAGTTACAGGAATACATCATAAAAACCCGTGGAATTTTTCGCAGGTTATCTGTAACTATACG
GAAACGGGGCGTAATAAAGTACATAGTAATCTTAAGGCAATACCTAAGGATGTTCTCAACCAAGTTATGAGGACTTATTC
GAAGAATAAAAGTATTGAGTACAACGATAATAGGATATCAAAATACGTTGCTCAATATGGTAAGTGTTATGTAACTGGTG
AGGAAATTGGTATTGAACGTGTTCATTGTCATCACATTGTTCCCATTAAACAAGGTGGGGATGACAAGTACAACAACTTG
GTAATTGTAGATTGGTTTATACACAAACTGATTCACATGACGAATCTTAATAAGATTACACATTACCTTCGGTCTTTTAA
ACTTAACAAGAAACAAATGGATAAACTGAATGTGCTAAGAACTAAAGCTGGAAATGAACCGATAGTAACATAA

Protein sequence :
MLKKTKLRHSEYYDMQRKYDELYSNSLNGNNFYKLIDIIGSEENIRLAYRNIKTNKGSNTAGVDNLTIKDIWHLNDTKII
HEVRKRLNNYQPQAVKRVLIPKEGSDKKRPLGIPTIWDRLVQQSILQVLEPICEAKFHNHSYGFRPNRSTHHALSRVVSL
INIGHQHYCVDIDIKGFFDNVCHKKLLRQMWTLGIRDKSLLCVISKILKSEIEGEGIPNKGTPQGGIISPLLSNIVLNEL
DWWISSQWETYKPHRISTRHLGFRQYARKYTNLKCGYVVRYADDFKIMCRTYDEAQRFYHATVDFLKSRLGLEINPKKSK
VVNLKKNSSVFLGFKIKVVKQGKAKFGYIAKTSMSDKAITKAKRQLKERIKGIQKEPTSEKVTQFNSTLLGIQNYFKYAV
TIYMDLTEVNYSLRRVIRTRLRNNMKHMKFCETSVNFKRKTKGIQPNTKIYAVQNTPLLPVTGIHHKNPWNFSQVICNYT
ETGRNKVHSNLKAIPKDVLNQVMRTYSKNKSIEYNDNRISKYVAQYGKCYVTGEEIGIERVHCHHIVPIKQGGDDKYNNL
VIVDWFIHKLIHMTNLNKITHYLRSFKLNKKQMDKLNVLRTKAGNEPIVT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF2326 NP_815981.1 group II intron reverse transcriptase maturase Not tested Not named Protein 7e-115 46