Gene Information

Name : H175_ch3547 (H175_ch3547)
Accession : YP_007480007.1
Strain : Bacillus thuringiensis IS5056
Genome accession: NC_020376
Putative virulence/resistance : Resistance
Product : acetyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3513874 - 3514431 bp
Length : 558 bp
Strand : +
Note : CYSE/LACA/LPXA/NODL family

DNA sequence : 
ATGTTATATTTAAATCAAAAACCTGAATATAATAAATATGATATTGGTGATTATACTTATAGTAAAGTAGGGCCAACCAT
TTTTTCTTGGAACGATGAAACAAAATTAAAAATAGGTAAGTTTTGTTCATTAGCAGAAGAAGTCGTTTTCATACTTGGCG
GTGAACATCGCGCAGACTGGATAACGACTTATCCATTTAATGCACTTTTTGATGAAGGAGCACATATTACTGGTCACCCT
TCTTCAAAAGGTGATATCGTAGTCGGCAATGATGTATGGATTGGTTATCAATCCTGTATTTTATCTGGTGTTACAATTGG
TAACGGGGCCATTATCGGCGCCAGGAGCGTTGTTACAAAAGACGTACCCCCGTATGCAATTGTAGCTGGTAATCCTGCAA
AATTTGTTCGATATCGTTTCCCACAAGAAACGATTGACAAACTAGAGAATCTCGCATGGTGGGACTGGGACATTTCTGTT
ATAAAAGGAGCCATTCCATTACTACTCTCCGACAAAATCGACGAATTTTTCACCTCGCCCGAAAATGAATCTATATGA

Protein sequence : 
MLYLNQKPEYNKYDIGDYTYSKVGPTIFSWNDETKLKIGKFCSLAEEVVFILGGEHRADWITTYPFNALFDEGAHITGHP
SSKGDIVVGNDVWIGYQSCILSGVTIGNGAIIGARSVVTKDVPPYAIVAGNPAKFVRYRFPQETIDKLENLAWWDWDISV
IKGAIPLLLSDKIDEFFTSPENESI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 3e-28 47
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 7e-28 45
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 7e-28 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H175_ch3547 YP_007480007.1 acetyltransferase AM180355.1.gene2499. Protein 6e-30 48
H175_ch3547 YP_007480007.1 acetyltransferase CP001581.1.gene990.p Protein 4e-31 48
H175_ch3547 YP_007480007.1 acetyltransferase AY123251.gene2.p01 Protein 9e-29 47
H175_ch3547 YP_007480007.1 acetyltransferase JF268688.1.gene6.p01 Protein 3e-30 46
H175_ch3547 YP_007480007.1 acetyltransferase AF322577.2.gene4.p01 Protein 3e-28 45
H175_ch3547 YP_007480007.1 acetyltransferase AY740681.1.gene5.p01 Protein 3e-28 45
H175_ch3547 YP_007480007.1 acetyltransferase NC_002516.2.878374.p Protein 4e-30 43