Gene Information

Name : H175_ch2576 (H175_ch2576)
Accession : YP_007479037.1
Strain : Bacillus thuringiensis IS5056
Genome accession: NC_020376
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein YvcR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2590786 - 2591556 bp
Length : 771 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAATTTTGCAGGCAAATAGTATTAGTAAAGTATATAAAGGGAAAGTACCTTATAAAGCATTAGTAGATATTGATTT
ATCAATTCAAGAAGGTGAATTTGTAGGAATTATGGGCCCGTCAGGTAGTGGAAAAACAACGTTATTAAATATGGTATCTA
CTATTGATTCTCCATCATCGGGAGAAATTTTAATAAATGGTACAAATCCTTTTCAATTATCATCAGAAGAATTAGCGTTA
TTCCGCAGGAAACAATTAGGATTTGTATTTCAATCATTTAATCTTCTTAGCACACTTACTGTAAAAGAAAACATCGTATT
GCCGATGACTTTAGATGGTGTTTCCGTGCAAGAAATGAACAAGCGATTGGAAGAGATTGCAGAAAAGTTAAATATTACAG
ATATCTTGAATAAAAGAACGTTTGAAATATCAGGGGGACAAGCTCAAAGAACAGCAATCGCTCGTGCGATCGTTCATAAG
CCGCAATTATTACTTGCAGATGAACCAACAGGGAACTTGGACTCTAAATCTTCAAATGATGTAATGGAGATGCTTGATAC
TCTAAATAAAGAAGAAAAAGCAACGATGATGTTAGTTACACATGATCCGTATGCAGCGAGCTTTTGCAGTAGAGTAGTAT
TTATTAAAGATGGTCAACTTTATAACGAAATTTATTGTGGTGAAAGCAGACAAGCCTTTTATCAAAAGATTATGGATGTT
CTTTCTTTGTTAGGAGGGAAAAGGCATGACTTTTCGTCAGTTCGCATTTAA

Protein sequence : 
MEILQANSISKVYKGKVPYKALVDIDLSIQEGEFVGIMGPSGSGKTTLLNMVSTIDSPSSGEILINGTNPFQLSSEELAL
FRRKQLGFVFQSFNLLSTLTVKENIVLPMTLDGVSVQEMNKRLEEIAEKLNITDILNKRTFEISGGQAQRTAIARAIVHK
PQLLLADEPTGNLDSKSSNDVMEMLDTLNKEEKATMMLVTHDPYAASFCSRVVFIKDGQLYNEIYCGESRQAFYQKIMDV
LSLLGGKRHDFSSVRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-27 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 1e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H175_ch2576 YP_007479037.1 ABC transporter ATP-binding protein YvcR CP001581.1.gene598.p Protein 5e-42 46
H175_ch2576 YP_007479037.1 ABC transporter ATP-binding protein YvcR NC_012469.1.7686878. Protein 1e-39 45
H175_ch2576 YP_007479037.1 ABC transporter ATP-binding protein YvcR CP001581.1.gene798.p Protein 7e-40 43
H175_ch2576 YP_007479037.1 ABC transporter ATP-binding protein YvcR NC_008702.1.4606598. Protein 4e-36 42