Gene Information

Name : H175_ch1597 (H175_ch1597)
Accession : YP_007478058.1
Strain : Bacillus thuringiensis IS5056
Genome accession: NC_020376
Putative virulence/resistance : Virulence
Product : Flagellum-specific ATP synthase FliI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1628214 - 1629518 bp
Length : 1305 bp
Strand : +
Note : -

DNA sequence :
ATGAGCCGCCTGTTAATGAATGAGAACGAAAAATGGAATAAGTTCATTGAAACACCGCTGTATACGAAAGTAGGCAAAGT
TCATAGTGTACAAGAACAGTTTTTCGTAGCAAAAGGGCCGAAAGCGAAGATCGGAGATGTTTGCTTCGTTGGAGAACATA
ACGTCTTATGTGAGGTGATTGCCATTGAAAAAGAAAATAATATGCTACTTCCATTTGAACAGACAGAAAAAGTATGTTAT
GGAGATTCAGTGACATTAGTTTCAGAAGATGTTGTTGTACCACGTGGTAATCACTTGCTCGGAAAGGTGTTAAGTGCAAA
TGGTGAAGTGTTAAATGAGGAAGCTGAAAACATTCCATTACAGAAAATTAAACTAGATGCACCGCCTATACATGCATTTG
AACGTGAAGAGATTACCGATGTATTTGAAACAGGAATAAAATCAATTGATTCTATGCTAACAATTGGTATCGGTCAAAAG
ATTGGTATTTTTGCTGGGTCAGGTGTTGGTAAATCTACTTTACTTGGAATGATAGCAAAAAATGCAAAAGCTGATATAAA
CGTTATTAGTTTAGTAGGAGAACGTGGTCGGGAAGTAAAAGACTTTATTCGAAAAGAGTTAGGCGAGGAAGGGATGCGAA
AAAGCGTCGTTGTTGTAGCGACGTCAGATGAAAGTCACCTTATGCAACTTCGTGCCGCGAAACTCGCAACGTCTATTGCT
GAATACTTCCGTGATCAAGGCAATAACGTATTACTTATGATGGACTCTGTTACTCGTTTCGCCGATGCACGAAGAAGTGT
TGATATTGCTGTTAAAGAGTTACCGATTGGTGGTAAAACACTGCTAATGGAAAGTTATATGAAGAAGCTGTTAGAGCGGT
CTGGGAAAACACAAAAGGGATCTATAACAGGTATTTATACGGTGCTTGTTGATGGGGACGATTTAAATGGTCCCGTACCA
GATTTAGCACGTGGTATTTTAGATGGACATATTGTATTAAAGCGTGAGCTTGCAACGCTTAGTCATTATCCTGCAATTTC
AGTATTAGATTCAGTAAGTAGGATTATGGAAGAAATTGTTTCGCCACATCATTGGCAACTTGCAAATGAAATGAGAAAAA
TTTTATCAATTTATAAAGAAAATGAATTGTATTTTAAGTTAGGAACGATTCAAGAAAATGAAGAAAATGCTTATATTTTT
GAATGTAAAAATAAAGTAGAAGGTATAAATACATTTTTAAAGCAAGGTCGATCGGATAGTTTCCAATTTGATGATATCGT
TGAAGCGATACACCATATAGTATAA

Protein sequence :
MSRLLMNENEKWNKFIETPLYTKVGKVHSVQEQFFVAKGPKAKIGDVCFVGEHNVLCEVIAIEKENNMLLPFEQTEKVCY
GDSVTLVSEDVVVPRGNHLLGKVLSANGEVLNEEAENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQK
IGIFAGSGVGKSTLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRAAKLATSIA
EYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIGGKTLLMESYMKKLLERSGKTQKGSITGIYTVLVDGDDLNGPVP
DLARGILDGHIVLKRELATLSHYPAISVLDSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIF
ECKNKVEGINTFLKQGRSDSFQFDDIVEAIHHIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-70 46
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-70 46
escN AAK26715.1 EscN Virulence LEE Protein 8e-70 43
escN AAL57542.1 EscN Virulence LEE Protein 8e-70 43
escN AAC38383.1 EscN Virulence LEE Protein 6e-69 43
escN CAC81862.1 EscN protein Virulence LEE II Protein 1e-69 43
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-67 43
ECs4568 NP_312595.1 EscN Virulence LEE Protein 9e-69 42
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 2e-69 42
escN CAI43874.1 EscN protein Virulence LEE Protein 7e-70 42
escN YP_003223475.1 translocator EscN Virulence LEE Protein 9e-70 42
escN AAC31513.1 L0034 Virulence LEE Protein 7e-69 42
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 7e-69 42
escN YP_003236088.1 translocator EscN Virulence LEE Protein 1e-68 42
escN NP_290268.1 hypothetical protein Virulence LEE Protein 9e-69 42
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-48 41
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 1e-48 41
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-48 41
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-48 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H175_ch1597 YP_007478058.1 Flagellum-specific ATP synthase FliI VFG2144 Protein 2e-76 43
H175_ch1597 YP_007478058.1 Flagellum-specific ATP synthase FliI VFG0048 Protein 3e-72 43
H175_ch1597 YP_007478058.1 Flagellum-specific ATP synthase FliI VFG0730 Protein 4e-69 43
H175_ch1597 YP_007478058.1 Flagellum-specific ATP synthase FliI VFG0812 Protein 4e-69 42
H175_ch1597 YP_007478058.1 Flagellum-specific ATP synthase FliI VFG0555 Protein 5e-49 41