Gene Information

Name : CFSAN001992_04700 (CFSAN001992_04700)
Accession : YP_007470698.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : amino acid permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 900951 - 902294 bp
Length : 1344 bp
Strand : +
Note : COG0531 Amino acid transporters

DNA sequence :
ATGAAAAAAGTCAAAAAATTGTCTCTTACCGATTTAGTGCTTTATGGTCTGGTGTTTATGGTGCCTATCGCGCCAGTCTC
TCTTTATGGCGTCGTTTATAATCTTTCGCACGGTATGGTTGCGCTGGTTTATATTATTGGCGCGATCGCGATGTTTTTTA
CCGCGTACAGCTACTCTACCTTATCGCAGCATATCTCCTCGTCGGGTTCGGCCTATGCGTATGCTGGCATATGCATTAAT
CCCGCCGTAGGGTTTCTGACCGGATGGATATTACTGCTGGATTATCTTTTGTTCCCTACGCTCGTGGCGGTGCTGGGCGG
CGTCGCGGTCCACGCTATTTTACCGCAAATCCCGGTCTGGGTCTGGCCGTTGATTTATGTGGCTATTGGCACCGGAGTCA
ACTATCTCGGGATACAGCAAACGGCGAAATTTGATAAGTTACTGGTCTTCATTCAACTCGGTATTCTGGCGATTTTCGTT
CTGCTCATTGTCCGTCTGTTGATGCTGGACAGTAGTCAGATAACGCTTTCCTTCCGGCCTTTTTTCGATTCACAGTGGTT
CACCCCAGGGCTCATCGCGACGGCGATTTCGGTGGCTGCGCTGAACTTTCTCGGCTTTGACGCTATCAGTACATTAAGTG
AAGAAAGCGAAGGCGGGGGACGCGCCGTCAGTAAAGCAACGCTGTTGGCGTTAGTTTTGGCGACGGTACTGTTTATTATC
GTTGTGGCGTTTGCGGCGTTCGCCACCGGTAATGTCGACCGCTTCGCGGAAGGTAATGCGACGAATGAAGCATTTTTCAC
CATTGCCGGCAACGTTGGCGGTATCTGGCTCAAAGTGGCGTTTTCCATCATTGTGGCGTTTGTGTGCGCCGTCGGAAACA
TTATTACCGCGCAAACGGCGGTGTCCAGAGTGCTATTTTCAATGGGGCGCGACCGAATGTTGCCCGCCTTCCTCGCTCAC
GTCCATACCACGCGTAAAACGCCGGATTATGCCATTCTGTTTACCGGCGGCGTCACCCTGCTGCTCAGCTACCTGTTTTC
CGGCAAGATTGAATCTATCTCCACGCTGGTGAACTTTGGCGCGCTTTTCGCTTTTTTTGTCGTGAACCTGTGTGTGTTTA
TTCTGTTCAATTTCCGGATGAAAGCCCAGCGGCGCATTTTCGCCCATGTCATTTCGCCGATCATGGGGATGATCGTCATC
GGCTACGTCTGTTTAAACATGAACATTCACGCTCTGATACTCGGAATTAGCTGGGCGGCGATCGGGATAGCGATTCTGTG
CTATCGAAAAGCACACAACCAAAACATCGCCATCGACCTGGAAGGCAAAAAGTTGCTCGATTGA

Protein sequence :
MKKVKKLSLTDLVLYGLVFMVPIAPVSLYGVVYNLSHGMVALVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGICIN
PAVGFLTGWILLLDYLLFPTLVAVLGGVAVHAILPQIPVWVWPLIYVAIGTGVNYLGIQQTAKFDKLLVFIQLGILAIFV
LLIVRLLMLDSSQITLSFRPFFDSQWFTPGLIATAISVAALNFLGFDAISTLSEESEGGGRAVSKATLLALVLATVLFII
VVAFAAFATGNVDRFAEGNATNEAFFTIAGNVGGIWLKVAFSIIVAFVCAVGNIITAQTAVSRVLFSMGRDRMLPAFLAH
VHTTRKTPDYAILFTGGVTLLLSYLFSGKIESISTLVNFGALFAFFVVNLCVFILFNFRMKAQRRIFAHVISPIMGMIVI
GYVCLNMNIHALILGISWAAIGIAILCYRKAHNQNIAIDLEGKKLLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1743 NP_456146.1 putative amino acid permease Not tested SPI-2 Protein 9e-177 99
t1247 NP_805052.1 amino acid permease Not tested SPI-2 Protein 9e-177 99
ycjj YP_216387.1 amino acid permease Not tested SPI-2 Protein 5e-178 99
orf48 NP_460344.1 amino acid permease Not tested SPI-2 Protein 5e-178 99
ORF48 CAA68204.1 amino acid permease YeeF like protein Not tested SPI-2 Protein 5e-174 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_04700 YP_007470698.1 amino acid permease VFG0480 Protein 2e-178 99