Gene Information

Name : CFSAN001992_04655 (CFSAN001992_04655)
Accession : YP_007470689.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 890425 - 891045 bp
Length : 621 bp
Strand : -
Note : COG4566 Response regulator

DNA sequence : 
ATGGCGACAATTCATCTACTGGATGATGATACGGCGGTCACTAACGCGTGCGCGTTTTTACTGGAAAGTCTGGGATATGA
CGTAAAATGCTGGACGCAGGGGGCGGATTTTTTGGCGCAGGCCAGTCTGTATCAGGTCGGAGTCGTATTACTGGATATGC
GAATGCCGGTACTGGATGGGCAGGGCGTTCATGATGCGTTGCGCCAGTGCGGAAGTACCCTGGCGGTTGTTTTTCTTACC
GGGCATGGCGATGTACCGATGGCCGTGGAGCAGATGAAACGCGGTGCCGTCGATTTTCTGCAAAAACCGGTATCGGTAAA
ACCGCTACAGGCGGCGCTGGAGCGTGCGCTGACGGTTTCATCGGCAGCGGTGGCGCGCCGTGAGATTATACTTTGTTACC
AGCAGTTGACGCCGAAAGAGCGTGAGCTGGCCAGCCTGGTGGCAAAAGGATTTATGAACCGTGAAATTGCGGAAGCGATG
AATATCGCGGTGCGTACCGTAGAGGTGCACCGCGCCAGAGTCATGGAAAAAATGCAGGCCGGTAGCCTGGCGGAACTGAT
TAGGCGTTTCGAAAAAATGGCCTCGCCAGAGACCAGAATACGAACAACGTATGAACCATGA

Protein sequence : 
MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQVGVVLLDMRMPVLDGQGVHDALRQCGSTLAVVFLT
GHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAM
NIAVRTVEVHRARVMEKMQAGSLAELIRRFEKMASPETRIRTTYEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 2e-94 99
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 2e-94 99
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 2e-94 99
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 1e-94 99
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 1e-94 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_04655 YP_007470689.1 response regulator VFG0488 Protein 4e-95 99