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Name : CFSAN001992_04630 (CFSAN001992_04630) Accession : YP_007470684.1 Strain : Salmonella enterica CFSAN001992 Genome accession: NC_020307 Putative virulence/resistance : Virulence Product : two component system sensor kinase SsrA Function : - COG functional category : - COG ID : - EC number : - Position : 884550 - 887312 bp Length : 2763 bp Strand : + Note : COG0642 Signal transduction histidine kinase DNA sequence : ATGAATTTGCTCAATCTCAAGAATACGCTGCAAACATCTTTAGTAATCAGGCTAACTTTTTTATTTTTATTAACAACAAT AATTATTTGGCTGCTATCTGTGCTTATTGCAGCTTATATATCAATGGTTCAGAAACGGCAGCATATAATAGAGGACTTAT CTGTTCTATCCGAGATGAATATTGTACTAAGCAATCAACGATTTGAAGAGGCTGAGCGTGACGCTAAAAACTTAATGTAT CAATGCTCATTAGCGACTGAGATTCATCATAACGATATTTTCCCTGAGGTGAGCCGGCACCTTTCTGTCGGTCCTTCAAA TTGCACGCCGACGCTAAACGGAGAGAAGCACCGTATCTTTCTGCAGTCCTCTGATATCGATGAAAAAAGCTTTCGTCGCG ATAGTTTTATTCTTAACCATAAAAATGAGATTTCGTTATTATCTACTGATAACCCTTCAGATTATTCAACTCTACAGCCT TTAACGCGAAAAAGCTTTCCTTTATACCCAACCCATGCCGGGTTTTACTGGAGTGAACCAGAATACATAAACGGCAAAGG ATGGCACGCTTCCGTTGCGGTTGCCGATCAGCAAGGCGTATTTTTTGGGGTGACGGTTAAACTTCCTGATCTCATTACTA AGAGCCACCTGCCATTAGATGATAGTATTCGAGTATGGCTGGATCAAAACAACCACTTATTGCCGTTTTCATACATCCCG CAAAAAATACGTACACAGTTAGAAAATGTAACGCTGCATGATGGATGGCAGCAAATTCCCGGATTTCTGATATTACGCAC AACCTTGCATGGCCCCGGATGGAGTCTGGTTACGCTGTACCCATACGGTAATCTACATAATCGCATCTTAAAAATTATCC TTCAACAAATCCCCTTTACATTAACAGCATTGGTGTTGATGACGTCGGCTTTTTGTTGGTTACTACATCGCTCACTGGCC AAACCGTTATGGCGTTTTGTCGATGTCATTAATAAAACCGCAACTGCACCGCTGAGCACACGTTTACCAGCACAACGACT GGATGAATTAGATAGTATTGCCGGTGCTTTTAACCAACTGCTTGATACTCTACAAGTCCAATACGACAATCTGGAAAACA AAGTCGCAGAGCGCACCCAGGCGCTAAATGAAGCAAAAAAACGCGCTGAGCAAGCTAACAAACGTAAAAGCATTCATCTT ACGGTAATAAGTCATGAGTTACGTACTCCGATGAATGGCGTACTCGGTGCGATTGAATTATTACAAACCACCCCTTTAAA CATAGAGCAGCAAGGATTAGCTGATACCGCCAGGAATTGTACACTGTCTTTGTTAGCTATTATTAATAATCTGCTGGATT TTTCACGCATCGAGTCTGGTCATTTCACATTACATATGGAAGAAACAGCGTTACTGCCGTTACTGGACCAGGCAATGCAA ACCATCCAGGGGCCGGCGCAAAGCAAAAAACTGTCATTACGTACTTTTGTCGGTCAACATGTCCCTCTCTATTTTCATAC CGACAGTATCCGTTTACGGCAAATTTTGGTTAATTTACTCGGGAACGCGGTAAAATTTACCGAAACCGGAGGGATACGTC TGACGGTCAAGCGTCATGAGGAACAATTAATATTTCTGGTTAGCGATAGCGGTAAAGGGATTGAAATACAGCAGCAGTCT CAAATCTTTACTGCTTTTTATCAAGCAGACACAAATTCGCAAGGTACAGGAATTGGACTGACTATTGCGTCAAGCCTGGC TAAAATGATGGGCGGTAATCTGACACTAAAAAGTGTCCCCGGGGTTGGAACCTGTGTCTCGCTAGTATTACCCTTACAAG AATACCAGCCGCCTCAACCAATTAAAGGGACACTGTCAGCGCCGTTCTGCCTGCATCGCCAACTGGCTTGCTGGGGAATA CGCGGCGAGCCACCCCACCAGCAAAATGCGCTTCTCAACGCAGAGCTTTTGTATTTCCCCGGAAAACTTTACGACCTGGC GCAACAGTTAATATTGTGTACACCAAATATACCAGTAATAAATAATTTGTTACCACCCTGGCAGTTGCAGATTCTTTTGG TTGATGATGCCGATATTAATCGGGATATCATCGGCAAAATGCTTGTCAGCCTGGGCCAACACGTCACTATTGCCGCCAGT AGTAACGAGGCTCTGACTTTATCACAACAGCAGCGATTCGATTTAGTACTGATTGACATTAGAATGCCAGAAATAGATGG TATTGAATGTGTACAATTATGGCACGATGAGCCGAATAATTTAGATCCTGACTGCATGTTTGTGGCGCTATCCGCTAGCG TAGCGACAGAAGATATTCATCGTTGTAAAAAAAATGGGATTCATCATTACATTACCAAACCAGTGACGTTGGCTACCTTA GCTCGCTATATCAGTATTGCCGCAGAATATCAACTTTTGCGAAATATAGAGCTACAGGAGCAGGATCCGAGTCGCTGCTC AGCGCTACTGGCGACAGATGATATGGTCATTAATAGCAAGATTTTCCAATCACTGGACCTCTTGCTGGCTGATATTGAAA ATGCCGTATCGGCTGGAAAAAAAATCGATCAGTTAATTCACACATTAAAAGGCTGTTTAGGTCAAATAGGGCAGACTGAA TTGGTATGCTATGTCATAGACATTGAGAATCGCGTAAAAATGGGGAAAATCATCGCGCTGGAGGAACTAACCGACTTACG CCAGAAAATACGTATAATCTTCAAAAACTACACCATTACTTAA Protein sequence : MNLLNLKNTLQTSLVIRLTFLFLLTTIIIWLLSVLIAAYISMVQKRQHIIEDLSVLSEMNIVLSNQRFEEAERDAKNLMY QCSLATEIHHNDIFPEVSRHLSVGPSNCTPTLNGEKHRIFLQSSDIDEKSFRRDSFILNHKNEISLLSTDNPSDYSTLQP LTRKSFPLYPTHAGFYWSEPEYINGKGWHASVAVADQQGVFFGVTVKLPDLITKSHLPLDDSIRVWLDQNNHLLPFSYIP QKIRTQLENVTLHDGWQQIPGFLILRTTLHGPGWSLVTLYPYGNLHNRILKIILQQIPFTLTALVLMTSAFCWLLHRSLA KPLWRFVDVINKTATAPLSTRLPAQRLDELDSIAGAFNQLLDTLQVQYDNLENKVAERTQALNEAKKRAEQANKRKSIHL TVISHELRTPMNGVLGAIELLQTTPLNIEQQGLADTARNCTLSLLAIINNLLDFSRIESGHFTLHMEETALLPLLDQAMQ TIQGPAQSKKLSLRTFVGQHVPLYFHTDSIRLRQILVNLLGNAVKFTETGGIRLTVKRHEEQLIFLVSDSGKGIEIQQQS QIFTAFYQADTNSQGTGIGLTIASSLAKMMGGNLTLKSVPGVGTCVSLVLPLQEYQPPQPIKGTLSAPFCLHRQLACWGI RGEPPHQQNALLNAELLYFPGKLYDLAQQLILCTPNIPVINNLLPPWQLQILLVDDADINRDIIGKMLVSLGQHVTIAAS SNEALTLSQQQRFDLVLIDIRMPEIDGIECVQLWHDEPNNLDPDCMFVALSASVATEDIHRCKKNGIHHYITKPVTLATL ARYISIAAEYQLLRNIELQEQDPSRCSALLATDDMVINSKIFQSLDLLLADIENAVSAGKKIDQLIHTLKGCLGQIGQTE LVCYVIDIENRVKMGKIIALEELTDLRQKIRIIFKNYTIT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spiR | AAC44299.1 | SpiR | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ssrA | NP_456136.1 | putative two-component sensor kinase | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ssrA | NP_805063.1 | two-component sensor kinase | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ssrA | NP_460357.1 | sensor kinase | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ssrA | YP_216400.1 | secretion system regulator:sensor component | Virulence | SPI-2 | Protein | 0.0 | 99 |
| YPO0256 | YP_002345336.1 | two-component sensor/regulator | Not tested | Not named | Protein | 1e-169 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN001992_04630 | YP_007470684.1 | two component system sensor kinase SsrA | VFG0493 | Protein | 0.0 | 99 |
