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Name : CFSAN001992_04615 (CFSAN001992_04615) Accession : YP_007470681.1 Strain : Salmonella enterica CFSAN001992 Genome accession: NC_020307 Putative virulence/resistance : Virulence Product : type III secretion system protein SsaD Function : - COG functional category : - COG ID : - EC number : - Position : 881061 - 882272 bp Length : 1212 bp Strand : - Note : - DNA sequence : ATGGCATATCTCATGGTTAATCCAAAGAGCTCATGGAAAATACGTTTTTTAGGTCACGTTTTACAAGGCCGGGAAGTATG GCTGAATGAAGGTAACCTGTCACTGGGGGAGAAAGGATGCGATATTTGTATTCCGCTTACTATAAATGAAAAAATTATTC TGAGAGAACAGGCAGATAGTTTATTTGTTGATGCCGGGAAAGCCAGAGTTAAAGTTAACGGCCGCAGATTTAATCCAAAT AAGCCGCTACCATCCAGTGGGGTTTTGCAGGTTGCGGGAGTGGCTATCGCGTTTGGTAAACAGGATTGTGAACTTGCTGA TTATCAAATACCCGTTTCCAGATCAGGGTACTGGTGGTTGGCTGGCGTATTCTTGATTTTCATCGGTGGAATGGGGGGCC TGTTAAGTATTGGCGGTCAGCCTGAAACGGTAAATGACTTACCTTTGCGGGTTAAGTTTTTATTAGACAAAAGCAATATT CATTATGTGCGGGCGCAATGGAAAGAAGATGGCAGCCTGCAGTTGTCCGGTTATTGCTCGTCAAGCGAACAGATGCAAAA GGTGAGAGCGACTCTCGAATCATGGGGGGTCATGTATCGGGATGGTGTAATCTGTGATGACTTATTGGTACGAGAAGTGC AGGATGTTTTGATAAAAATGGGTTACCCGCATGCTGAAGTATCCAGCGAAGGGCCGGGAAGCGTGTTAATTCATGATGAT ATACAAATGGATCAGCAATGGCGTAAGGTTCAACCATTACTTGCAGATATTCCCGGGTTATTGCACTGGCAGATTAGTCA TTCTCATCAGTCTCAGGGGGATGATATTATTTCTGCGATAATAGAGAACGGTTTAGTGGGGCTTGTCAATGTTACGCCAA TGCGGCGCTCTTTTGTTATCAGTGGTGTACTGGATGAATCTCATCAACGCATTTTGCAAGAAACGTTAGCAGCATTAAAG AAAAAGGACCCCGCTCTTTCTTTAATTTATCAGGATATTGCGCCTTCTCATGATGAAAGCAAGTATCTGCCTGCGCCAGT GGCTGGCTTTGTACAGAGTCGCCATGGTAATTACTTATTACTGACGAATAAAGAGCGTTTACGTGTAGGGGCATTGTTAC CCAATGGGGGAGAAATTGTCCATCTGAGTGCCGATGTGGTAACGATTAAACATAATGATACTTTGATTAACTATCCATTA GATTTTAAGTGA Protein sequence : MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADSLFVDAGKARVKVNGRRFNPN KPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVFLIFIGGMGGLLSIGGQPETVNDLPLRVKFLLDKSNI HYVRAQWKEDGSLQLSGYCSSSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDD IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVLDESHQRILQETLAALK KKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPL DFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaD | YP_216403.1 | secretion system apparatus protein SsaD | Virulence | SPI-2 | Protein | 1e-178 | 99 |
| ssaD | NP_456133.1 | putative pathogenicity island protein | Virulence | SPI-2 | Protein | 1e-178 | 99 |
| ssaD | NP_805066.1 | pathogenicity island protein | Virulence | SPI-2 | Protein | 1e-178 | 99 |
| spiB | AAC44302.1 | SpiB | Virulence | SPI-2 | Protein | 4e-140 | 99 |
| ssaD | NP_460360.1 | virulence protein | Virulence | SPI-2 | Protein | 5e-178 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN001992_04615 | YP_007470681.1 | type III secretion system protein SsaD | VFG0496 | Protein | 2e-178 | 99 |
