Gene Information

Name : CFSAN001992_04605 (CFSAN001992_04605)
Accession : YP_007470679.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : type III secretion system chaperone SseA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 880282 - 880608 bp
Length : 327 bp
Strand : -
Note : -

DNA sequence : 
ATGATGATAAAGAAAAAGGCTGCGTTTAGTGAATATCGTGATTTAGAGCAAAGTTACATGCAGCTAAATCACTGTCTTAA
AAAATTTCACCAAATCCGGGCTAAGGTGAGTCAACAGCTTGCTGAAAGTGCAGAGAGCCCCAAAAAGAGCAGAGAGACAG
AGAGTATTCTTCATAACCTATTTCCACAAGGCGTTGCCGGGGTTAACCAGGAGGCCGAGAAGGATTTAAAGAAAATAGTA
AGTTTGTTTAAACAACTTGAAGTACGACTGAAACAACTTAATGCTCAAGCCCCGGTGGAGATACCGTCAGGAAAAACAAA
AAGGTAA

Protein sequence : 
MMIKKKAAFSEYRDLEQSYMQLNHCLKKFHQIRAKVSQQLAESAESPKKSRETESILHNLFPQGVAGVNQEAEKDLKKIV
SLFKQLEVRLKQLNAQAPVEIPSGKTKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseA NP_460362.1 secretion system chaperone protein Virulence SPI-2 Protein 2e-45 99
sseA YP_216405.1 secretion system effector protein SseA Virulence SPI-2 Protein 1e-45 99
sseA NP_456131.1 putative pathogenicity island protein Virulence SPI-2 Protein 1e-45 99
sseA NP_805068.1 pathogenicity island protein Virulence SPI-2 Protein 1e-45 99
sseA AAC28878.1 SseA Virulence SPI-2 Protein 2e-45 99
sseA CAA12184.1 SseA Virulence SPI-2 Protein 2e-45 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_04605 YP_007470679.1 type III secretion system chaperone SseA VFG0498 Protein 7e-46 99