Gene Information

Name : CFSAN001992_04595 (CFSAN001992_04595)
Accession : YP_007470677.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : pathogenicity island 2 chaperone protein SscA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 879215 - 879688 bp
Length : 474 bp
Strand : -
Note : COG0457 FOG: TPR repeat

DNA sequence :
ATGAAAAAAGACCCGACCCTACAACAGGCACATGACACGATGCGGTTTTTCCGGCGTGGCGGCTCGCTGCGTATGTTGTT
GGATGACGATGTTACACAGCCGCTTAATACACTGTATCGCTATGCCATGCAGCTTATGGATGTAAAAGAGTTCGCCGGCG
CAGCGCGACTTTTTCAATTGCTGACGATATATGATGCCTGGTCATTTGACTACTGGTTTCGGTTAGGGGAATGCTGCCAG
GCTCAAAAACATTGGGGGGAAGCGATATACGCCTATGGACGCGCGGCACAAATTAAGATTGATGCGCCGCAGGCGCCATG
GGCCGCAGCGGAATGCTATCTCGCGTGTGATAACGTCTGTTATGCAATAAAAGCGCTAAAGGCTGTGGTGCGTATTTGCG
GCGAGGTCAGTGAACATCAAATCCTCCGACTACGTGCAGAAAAGATGTTACAGCAACTTTCTGACAGGAGCTAA

Protein sequence :
MKKDPTLQQAHDTMRFFRRGGSLRMLLDDDVTQPLNTLYRYAMQLMDVKEFAGAARLFQLLTIYDAWSFDYWFRLGECCQ
AQKHWGEAIYAYGRAAQIKIDAPQAPWAAAECYLACDNVCYAIKALKAVVRICGEVSEHQILRLRAEKMLQQLSDRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sscA NP_460364.1 secretion system chaperone Virulence SPI-2 Protein 4e-69 99
SC1420 YP_216407.1 secretion system chaperone protein SscA Virulence SPI-2 Protein 9e-70 99
sscA NP_456129.1 putative Type III secretion system chaperone protein Virulence SPI-2 Protein 5e-70 99
sscA NP_805070.1 type III secretion system chaperone protein Virulence SPI-2 Protein 5e-70 99
sscA AAC28880.1 putative secretion chaperone Virulence SPI-2 Protein 3e-69 99
sscA CAA12186.1 SscA Virulence SPI-2 Protein 3e-69 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_04595 YP_007470677.1 pathogenicity island 2 chaperone protein SscA VFG0500 Protein 1e-69 99