Gene Information

Name : CFSAN001992_04580 (CFSAN001992_04580)
Accession : YP_007470674.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : pathogenicity island 2 effector protein SseE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 876736 - 877152 bp
Length : 417 bp
Strand : -
Note : -

DNA sequence : 
ATGGTGCAAGAAATAGAGCAATGGTTGCGTCGGCATCAGGTGTTTACTGAGCCTGCATATTTAGGGGAGACCGCCATATT
ACTTGGGCAACAGTTTATATTATCGCCTTACCTGGTGATCTATCGTATTGAGGCAAAAGAAATGATTATTTGTGAGTTCA
GGCGCCTGACGCCCGGGCAACCTCGACCACAGCAATTGTTTCACTTACTGGGACTTTTACGCGGGATATTTGTGCATCAC
CCGCAGTTAACATGTTTAAAGATGTTGATAATCACCGACGTTCTGGATGAAAAAAAAGCCCTGCTACGCAGGAAATTATT
GCGCATCCTGACAGTAATGGGAGCGACCTTTACACAGCTTGATGGCGATAACTGGACAGTTTTATCCGCCGAGCATCTTA
TCCAGCGACGTTTTTAA

Protein sequence : 
MVQEIEQWLRRHQVFTEPAYLGETAILLGQQFILSPYLVIYRIEAKEMIICEFRRLTPGQPRPQQLFHLLGLLRGIFVHH
PQLTCLKMLIITDVLDEKKALLRRKLLRILTVMGATFTQLDGDNWTVLSAEHLIQRRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseE AAC28883.1 SseE Virulence SPI-2 Protein 3e-55 99
sseE CAA12189.1 SseE Virulence SPI-2 Protein 3e-55 99
sseE NP_456126.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 6e-55 99
sseE NP_805073.1 pathogenicity island effector protein Virulence SPI-2 Protein 6e-55 99
sseE YP_216410.1 secretion system effector SseE Virulence SPI-2 Protein 5e-55 99
sseE NP_460367.1 secreted effector protein Virulence SPI-2 Protein 5e-55 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_04580 YP_007470674.1 pathogenicity island 2 effector protein SseE VFG0503 Protein 1e-55 99