Gene Information

Name : CFSAN001992_04555 (CFSAN001992_04555)
Accession : YP_007470669.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : type III secretion system protein SsaH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 874189 - 874416 bp
Length : 228 bp
Strand : -
Note : -

DNA sequence : 
ATGTTTGCGGGCGTTAACCATAGCCTGATTTCCCAGGTACATGCGATGTTACCAGCGCTAACGGTTATTGTTCCGGATAA
AAAATTACAGTTGGTATGTCTGGCATTATTGTTGGCGGGTTTAAATGAGCCGCTAAAAGCCGCGAAAATTTTATCGGATA
TTGATTTGCCAGAGGCTATGGCGCTGCGTCTGTTATTTCCTGCACCAAATGAGGGGTTTGAAAATTGA

Protein sequence : 
MFAGVNHSLISQVHAMLPALTVIVPDKKLQLVCLALLLAGLNEPLKAAKILSDIDLPEAMALRLLFPAPNEGFEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaH CAA12194.1 SsaH Virulence SPI-2 Protein 9e-17 100
ssaH AAX49621.1 SsaH Virulence SPI-2 Protein 9e-17 100
ssaH NP_460372.1 type III secretion system apparatus protein Virulence SPI-2 Protein 1e-16 100
ssaH YP_216415.1 secretion system apparatus protein SsaH Virulence SPI-2 Protein 9e-17 100
ssaI AAC28875.1 SsaI Virulence SPI-2 Protein 5e-16 99
ssaH NP_456121.1 putative pathogenicity island protein Virulence SPI-2 Protein 2e-16 99
ssaH NP_805078.1 pathogenicity island protein Virulence SPI-2 Protein 2e-16 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_04555 YP_007470669.1 type III secretion system protein SsaH VFG0508 Protein 4e-17 100