Gene Information

Name : CFSAN001992_04550 (CFSAN001992_04550)
Accession : YP_007470668.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : type III secretion system protein SsaI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 873929 - 874177 bp
Length : 249 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCGTAGTGCCTGTAAGCACTCAATCTTATGTAAAGTCCTCTGCAGAACCGAGTCAGGAGCAAATTAATTTTTTTGA
ACAATTTCTGAAAGATGATGCATCCACCAGTAACGCCAGTGCTTTATTACCGCAGGTTATGTTGACCAGTCAAATGGATT
ATATGCAGTTAACGGTAGGCGTCGATTATTTTGCCAGAATATCAGGCGCAGCATCGCAAGCGCTTAATAAGCTGGATAGC
ATGCCATGA

Protein sequence : 
MSVVPVSTQSYVKSSAEPSQEQINFFEQFLKDDASTSNASALLPQVMLTSQMDYMQLTVGVDYFARISGAASQALNKLDS
MP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaI AAX49622.1 SsaI Virulence SPI-2 Protein 6e-30 93
ssaI NP_460373.1 type III secretion system apparatus protein Virulence SPI-2 Protein 9e-30 93
ssaI CAA12195.1 SsaI Virulence SPI-2 Protein 6e-30 93
ssaI NP_456120.1 putative pathogenicity island protein Virulence SPI-2 Protein 5e-28 91
ssaI NP_805079.1 pathogenicity island protein Virulence SPI-2 Protein 5e-28 91
ssaI YP_216416.1 secretion system apparatus protein SsaI Virulence SPI-2 Protein 8e-29 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_04550 YP_007470668.1 type III secretion system protein SsaI VFG0509 Protein 3e-30 93