Gene Information

Name : CFSAN001992_04545 (CFSAN001992_04545)
Accession : YP_007470667.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : type III secretion system lipoprotein SsaJ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 873183 - 873932 bp
Length : 750 bp
Strand : -
Note : COG4669 Type III secretory pathway, lipoprotein EscJ

DNA sequence :
ATGAAGGTTCAGCGTATAGTATTTCTTACTGTCCTTACGTTCTTTCTTACGGCATGTGATGTGGATCTTTATCGCTCATT
GCCAGAAGATGAGGCGAATCAAATGCTGGCATTACTTATGCAGCATCATATTGATGCGGAAAAAAAACAGGAAGAGGATG
GTGTAACCTTACGTGTCGAGCAGTCGCAGTTTATTAATGCGGTTGAGCTACTTAGACTTAACGGTTATCCGCATCGGCAG
TTTACAACGGCGGATAAGATGTTTCCGGCTAATCAGTTAGTGGTATCACCCCAGGAAGAACAGCAGAAGATTAATTTTTT
AAAAGAACAAAGAATTGAAGGAATGCTGAGTCAGATGGAGGGCGTAATTAATGCAAAAGTGACCATTGCGCTACCGACTT
ATGATGAGGGAAGTAACGCTTCTCCGAGCTCAGTTGCCGTATTTATAAAATATTCACCTCAGGTCAATATGGAGGCCTTT
CGGGTAAAAATTAAAGATTTAATAGAAATGTCAATTCCTGGGTTGCAATACAGTAAGATTAGTATCTTGATGCAGCCTGC
TGAATTCAGAATGGTACCTGACGTACCCGCGAGACAAACATTCTGGATTATGGACGTGATCAACGCCAATAAAGGGAAGG
TGGTGAAGTGGTTGATGAAATACCCTTATCAGTTGATGTTATCGTTGACAGGACTGTTATTAGGAGTGGGCATCCTGATC
GGCTATTTTTGCCTGAGACGCCGTTTTTGA

Protein sequence :
MKVQRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ
FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAF
RVKIKDLIEMSIPGLQYSKISILMQPAEFRMVPDVPARQTFWIMDVINANKGKVVKWLMKYPYQLMLSLTGLLLGVGILI
GYFCLRRRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaJ CAA70532.1 secretion system apparatus Virulence SPI-2 Protein 2e-105 99
ssaJ NP_460374.1 needle complex inner membrane lipoprotein Virulence SPI-2 Protein 3e-105 99
ssaJ YP_216417.1 secretion system apparatus protein SsaJ Virulence SPI-2 Protein 2e-105 99
ssaJ NP_456119.1 putative pathogenicity island lipoprotein Virulence SPI-2 Protein 5e-106 99
ssaJ NP_805080.1 pathogenicity island lipoprotein Virulence SPI-2 Protein 5e-106 99
ssaJ CAA12196.1 SsaJ Virulence SPI-2 Protein 1e-85 99
YPO0263 YP_002345344.1 type III secretion system apparatus lipoprotein Virulence Not named Protein 4e-50 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_04545 YP_007470667.1 type III secretion system lipoprotein SsaJ VFG0510 Protein 1e-105 99