Gene Information

Name : CFSAN001992_04535 (CFSAN001992_04535)
Accession : YP_007470665.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : type III secretion system protein SsaK
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 871946 - 872620 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTTTCACTTCACTTCCACTGACGGAAATTAACCATAAGCTACCCGCTCGAAATATTATTGAGTCACAGTGGATAAC
ATTACAATTAACTTTATTTGCACAAGAGCAACAAGCTAAGAGAGTTTCACATGCTATTGTGAGCTCCGCTTACCGTAAGG
CTGAAAAAATCATCCGAGACGCCTATCGTTATCAGCGTGAACAGAAAGTTGAGCAGCAACAAGAACTAGCGTGGTTGCGT
AAAAATACGCTGGAAAAAATGGAAGTGGAATGGCTGGAACAGCATGTAAAACATTTACAAGACGATGAAAATCAATTTCG
TTCATTGGTCGATCAAGCAGAGCATCATATTAAAAATAGTATAGAACAGGTTCTGTTGGCCTGGTTCGACCAACAGTCGG
TAGACAGTGTTATGTGCCATCGTCTGGCACGCCAGGCTACGGCTATGGCGGAAGAGGGAGCGCTTTATTTGCGTATTCAT
CCTGAAAAAGAGGCATTGATGCGTGAAACTTTTGGCAAGCGGTTTACGTTGATTATCGAGTCTGGTTTCTCTCCCGATCA
GGCTGAACTTTCCTCAACACGATATGCCGTTGAATTTTCACTTTCTCGTCATTTCAACGCGTTACTGAAATGGTTACGTA
ATGGTGAAGATAAAGGAGGTAGCGATGAATATTAA

Protein sequence : 
MSFTSLPLTEINHKLPARNIIESQWITLQLTLFAQEQQAKRVSHAIVSSAYRKAEKIIRDAYRYQREQKVEQQQELAWLR
KNTLEKMEVEWLEQHVKHLQDDENQFRSLVDQAEHHIKNSIEQVLLAWFDQQSVDSVMCHRLARQATAMAEEGALYLRIH
PEKEALMRETFGKRFTLIIESGFSPDQAELSSTRYAVEFSLSRHFNALLKWLRNGEDKGGSDEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaK NP_460376.1 type III secretion system apparatus protein Virulence SPI-2 Protein 3e-98 98
ssaK YP_216419.1 secretion system apparatus protein SsaK Virulence SPI-2 Protein 3e-99 98
STY1709 NP_456117.1 putative pathogenicity island protein Virulence SPI-2 Protein 1e-99 98
t1279 NP_805082.1 pathogenicity island protein Not tested SPI-2 Protein 1e-99 98
ssaK CAA70533.1 secretion system apparatus Virulence SPI-2 Protein 6e-97 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_04535 YP_007470665.1 type III secretion system protein SsaK VFG0511 Protein 1e-98 98