Gene Information

Name : CFSAN001992_04530 (CFSAN001992_04530)
Accession : YP_007470664.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : type III secretion system protein SsaL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 870964 - 871956 bp
Length : 993 bp
Strand : -
Note : -

DNA sequence : 
ATGAATATTAAAATTAATGAGATAAAAATGACGCCCCCTACAGCATTTACCCCTGGCCAGGTTATAGAGGAACAAGAGGT
TATTTCGCCTTCAATGTTAGCTCTCCAGGAGTTACAGGAAACGACGGGGGCAGCGCTCTATGAGACGATGGAAGAAATAG
GAATGGCGCTGAGTGGTAAACTGCGCGAAAGTTATAAATTCACTGATGCTGAGAAACTGGAGCGCAGACAGCAGGCTTTG
CTGCGTTTGATAAAACAAATACAGGAGGATAATGGAGCAACGTTGCGTCCGCTTACCGAAGAGAATAGTGATCCTGATTT
ACAGAATGCGTATCAAATTATCGCTCTTGCAATGGCGCTTACTGCCGGCGGGTTGTCAAAAAAGAAAAAACGCGATTTGC
AATCGCAACTGGATACGCTTACAGCGGAGGAGGGATGGGAACTTGCCGTTTTTAGTTTACTGGAACTTGGCGAAGTGGAT
ACCGCTACGCTGTCCTCGCTGAAGCGTTTTATGCAACAGGCGATAGACAACGATGAAATGCCCTTATCGCAGTGGTTCAG
ACGCGTGGCAGACTGGCCGGATCGCTGTGAACGGGTCCGTATTTTGCTAAGAGCGATAGCCTTTGAACTTAGCATATGCA
TCGAACCCTCGGAGCAAAGTCGTTTGGCCGCAGCATTAGTACGTTTGCGTCGTTTGTTGTTATTCCTTGGCCTTGAAAAA
GAGTGCCAGCGTGAGGAGTGGATTTGCCAGTTGCCGCCTAATACATTACTGCCGCTACTACTCGATATTATTTGTGAGCG
CTGGCTTTTCAGTGATTGGTTGCTTGATAGACTTACCGCTATAGTTTCTTCATCGAAGATGTTCAATCGGCTACTCCAAC
AACTTGATGCGCAGTTTATGCTGATACCCGATAACTGTTTTAACGACGAAGATCAACGTGAACAAATTCTCGAAACGCTT
CGTGAAGTAAAGGTAAATCAGGTTTTATTCTGA

Protein sequence : 
MNIKINEIKMTPPTAFTPGQVIEEQEVISPSMLALQELQETTGAALYETMEEIGMALSGKLRESYKFTDAEKLERRQQAL
LRLIKQIQEDNGATLRPLTEENSDPDLQNAYQIIALAMALTAGGLSKKKKRDLQSQLDTLTAEEGWELAVFSLLELGEVD
TATLSSLKRFMQQAIDNDEMPLSQWFRRVADWPDRCERVRILLRAIAFELSICIEPSEQSRLAAALVRLRRLLLFLGLEK
ECQREEWICQLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLLQQLDAQFMLIPDNCFNDEDQREQILETL
REVKVNQVLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaL NP_460377.1 type III secretion system apparatus protein Virulence SPI-2 Protein 2e-131 99
ssaL CAA70534.1 secretion system apparatus Virulence SPI-2 Protein 2e-131 99
ssaL YP_216420.1 secretion system apparatus protein SsaL Virulence SPI-2 Protein 6e-131 99
ssaL NP_456116.1 putative secretion system protein Virulence SPI-2 Protein 6e-128 98
ssaL NP_805083.1 secretion system protein Virulence SPI-2 Protein 6e-128 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_04530 YP_007470664.1 type III secretion system protein SsaL VFG0512 Protein 9e-132 99