Gene Information

Name : CFSAN001992_04510 (CFSAN001992_04510)
Accession : YP_007470660.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : type III secretion system protein SsaO
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 866837 - 867214 bp
Length : 378 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAACTTTGCTGGAGATAATCGCGCGGCGTGAAAAGCAATTACGCGGCAAACTTACCGTACTTGATCAGCAGCAACA
GGCGATTATTACTGAACAGCAGATTTGCCAGACGCGCGCTTTAGCAGTGACTACCAGACTGAAAGAATTAATGGGCTGGC
AAGGTACGTTATCTTGTCATTTATTGTTGGATAAGAAACAACAAATGGCCGGGCTATTCACTCAGGCGCAGAGCTTTTTG
ACGCAACGGCAGCAGTTAGAAAATCAGTATCAGCAGCTTGTCTCCCGGCGAAGCGAATTACAGAAGAATTTTAATGCGCT
TATGAAAAAGAAAGAAAAAATTACTATGGTATTAAGCGATGCGTATTACCAAAGTTGA

Protein sequence : 
METLLEIIARREKQLRGKLTVLDQQQQAIITEQQICQTRALAVTTRLKELMGWQGTLSCHLLLDKKQQMAGLFTQAQSFL
TQRQQLENQYQQLVSRRSELQKNFNALMKKKEKITMVLSDAYYQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaO NP_456112.1 putative type III secretion protein Virulence SPI-2 Protein 1e-36 99
ssaO NP_805087.1 type III secretion protein Virulence SPI-2 Protein 1e-36 99
ssaO NP_460381.1 type III secretion system apparatus protein Virulence SPI-2 Protein 8e-37 99
ssaO CAA70538.1 secretion system apparatus Virulence SPI-2 Protein 6e-37 99
ssaO YP_216424.1 secretion system apparatus protein SsaO Virulence SPI-2 Protein 5e-37 99
ssaO AAX49618.1 SsaO Virulence SPI-2 Protein 3e-31 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_04510 YP_007470660.1 type III secretion system protein SsaO VFG0516 Protein 2e-37 99