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Name : CFSAN001992_20750 (CFSAN001992_20750) Accession : YP_007473862.1 Strain : Salmonella enterica CFSAN001992 Genome accession: NC_020307 Putative virulence/resistance : Unknown Product : DNA-binding transcriptional activator CadC Function : - COG functional category : - COG ID : - EC number : - Position : 4280702 - 4282243 bp Length : 1542 bp Strand : - Note : COG3710 DNA-binding winged-HTH domains DNA sequence : ATGCAGCAACCTGTTGTACGCATTGGAGAGTGGCTGGTTACACCTTCTGTTAATCAGATCAGTCGTCAGGGACGCCAGAT TACTCTTGAACCACGGCTGATCGATCTTCTGATGTATTTTGCGCATCACCCGGATGAAGTGTTAAGCCGGGATAACATTA TTGATCATGTCTGGATGCGCACCATCGTGACCAACCATGTTGTCACCCAAAGCATTTCTGAACTACGCAAATCATTAAGA GATGGCGGAGACAGCAATGCTGAATACATTGTTACCGTACCTAAACGCGGCTATAAGCTGACGGCGCCGGTTATCTGGTG CGAAGAAAATAGCGATGAGATCGATAATTCATCAACGTCGCCGCCGCCGATCGCAGCGACGAATGCAGAACCGACGGAGG GGGTTCCTGCCGCTGCGCCTGTGCCGCCCGCCTCTTTGCAAACGCCGACTAAAAAGGCGAAAAAGCCGCGTATCGCTGCT TTCTGGACGTGGGTGATGTTCCTGCTCTCGCTGGCGACGCTGGTGGTGTTTATCGTGATGTCGGTGGTAGATCATAATGC CGCGGTAACAAAAACGCGGTTATTACTTAACCCACGAGATATAGATGTTCGTTTTGAAGGCGGCAATTCCTGTAATAACT GGGTCTCGCAGGAGTCCTACGCCATCGGTCTGGGCGGCTTAATCACCGACCTGCTGAACACCTACTCGACCTTTATGGTG CACGATAAAACTAATTACCGGGTCAATGAGCCAAGCAGCTCCGGTAAGACGTTAACCATTCAGTTTGTCAATCAGCGCCA CTATCGGGCGCAGCAGTGCTTTATGTCTGTGGTGCTCATTGATAACGCCGATGGTTCAACCATGCTGGATAAGCGTTATT TCGTCACCAATACTAACCAGTTGTCCATCCAGGATGATCTGTTTAATAGTCTGTCTTTCGTTTTAACACAGCCCTGGCCT GATCGTATGCGAGAACAACTGGCCCTGTTCAGAACGCCGCAAAATACCGCGCTGATGCGTTTTTATGAGGCGCGCCAGCT TATTCTGAGCGGCGATGCGCAGGCGCTAGGTAAAGCCAGCGATATTCTGAATGGCATTATTAAGGAAACGCCTGATTTCA ACTATGCCTATGAATATAAAGTGCTGGTAGATGTATTACGGCAATCACAGCAGCCGTTTGATAAAGAACAAGTGGCCGCA CTGAACGAAGAGTTTAAAAAAATAGATCAAATTCCGGGCGTTGAGAAAACGTCTGTTTATTATAAAATCAAGACCGTTGA TCTGTTAGGCAAAGGTGATATCGATGCAGCGTATGAGGAAATCAATAAAAGCATCGAGCTTGAAATGTCGTGGTTTAACT ATGTCCTGTTGGGGAAAGTTTACGAAATGAAAGGTGAGAATCGTCTGGCCGCTGATGCCTATCTGACCGCCTTTAATTTA CGTCCAGGTGAAAACACTCTGTACTGGATCGAGAACGGCGTATTTCAGACATCCGTTCAGAAAATTGTCCCTTATCTGAA TAGTTTTCTGGCAGAAGATTAA Protein sequence : MQQPVVRIGEWLVTPSVNQISRQGRQITLEPRLIDLLMYFAHHPDEVLSRDNIIDHVWMRTIVTNHVVTQSISELRKSLR DGGDSNAEYIVTVPKRGYKLTAPVIWCEENSDEIDNSSTSPPPIAATNAEPTEGVPAAAPVPPASLQTPTKKAKKPRIAA FWTWVMFLLSLATLVVFIVMSVVDHNAAVTKTRLLLNPRDIDVRFEGGNSCNNWVSQESYAIGLGGLITDLLNTYSTFMV HDKTNYRVNEPSSSGKTLTIQFVNQRHYRAQQCFMSVVLIDNADGSTMLDKRYFVTNTNQLSIQDDLFNSLSFVLTQPWP DRMREQLALFRTPQNTALMRFYEARQLILSGDAQALGKASDILNGIIKETPDFNYAYEYKVLVDVLRQSQQPFDKEQVAA LNEEFKKIDQIPGVEKTSVYYKIKTVDLLGKGDIDAAYEEINKSIELEMSWFNYVLLGKVYEMKGENRLAADAYLTAFNL RPGENTLYWIENGVFQTSVQKIVPYLNSFLAED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadC | NP_756990.1 | DNA-binding transcriptional activator CadC | Not tested | PAI II CFT073 | Protein | 1e-143 | 58 |
| cadC | AAL67383.1 | transcriptional activator | Not tested | PAI II CFT073 | Protein | 7e-144 | 58 |
