Gene Information

Name : CFSAN001992_02195 (CFSAN001992_02195)
Accession : YP_007470202.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : type III secretion protein SopE2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 402202 - 402924 bp
Length : 723 bp
Strand : +
Note : -

DNA sequence : 
GTGACTAACATAACACTATCCACCCAGCACTACAGAATCCATAGAAGTGACGTTGAACCAGTAAAAGAAAAAACAACGGA
GAAGGACATTTTTGCAAAAAGTATTACTGCCGTTAGAAATAGCTTTATCAGCCTGTCGACGAGTTTGTCAGATCGCTTTA
GCCTGCATCTGCAAACAGACATACCGACTACCCATTTTCATCGTGGGAGCGCCTCTGAGGGGAGGGCAGTATTAACCAGT
AAAACTGTTAAAGATTTTATGCTGCAAAAGCTCAATAGCCTGGATATCAAAGGTAATGCGAGTAAAGATCCGGCCTATGC
TCGTCAGACATGCGAAGCCATATTATCAGCCGTGTACAGTAATAATAAAGATCACTGTTGTAAATTACTCATCAGTAAAG
GGGTCAGTATTACCCCCTTTCTGAAAGAGATAGGAGAGGCTGCGCAGAATGCGGGGCTACCTGGAGAGATGAAAAACGGC
GTATTTACTCCAGGTGGGGCAGGGGCGAATCCTTTTGTCGTCCCCCTCATTGCTGCAGCGAGCATTAAATATCCGCATAT
GTTTATAAATCATAATCAGCAGGTGTCTTTTAAAGCGCATGCTGAGAAAATCGTTATGAAAGAAGTTACGCCGCTGTTTA
ATAAGGGGACGATGCCAACGCCACAACAATTTCAGTTAACTATAGAAAATATTGCGAATAAGTATCTTCAGAATGCCTCC
TGA

Protein sequence : 
MTNITLSTQHYRIHRSDVEPVKEKTTEKDIFAKSITAVRNSFISLSTSLSDRFSLHLQTDIPTTHFHRGSASEGRAVLTS
KTVKDFMLQKLNSLDIKGNASKDPAYARQTCEAILSAVYSNNKDHCCKLLISKGVSITPFLKEIGEAAQNAGLPGEMKNG
VFTPGGAGANPFVVPLIAAASIKYPHMFINHNQQVSFKAHAEKIVMKEVTPLFNKGTMPTPQQFQLTIENIANKYLQNAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sopE NP_458691.1 invasion-associated secreted protein. Virulence SPI-7 Protein 2e-80 69
sopE NP_807899.1 invasion-associated secreted protein Virulence SPI-7 Protein 2e-80 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_02195 YP_007470202.1 type III secretion protein SopE2 VFG0467 Protein 4e-109 98