|
Name : CFSAN001992_20200 (CFSAN001992_20200) Accession : YP_007473752.1 Strain : Salmonella enterica CFSAN001992 Genome accession: NC_020307 Putative virulence/resistance : Unknown Product : putative major capsid protein Function : - COG functional category : - COG ID : - EC number : - Position : 4169196 - 4170263 bp Length : 1068 bp Strand : - Note : - DNA sequence : ATGCGCCCGGAAACCCGTTTTAAGTTTAATGCCTATCTGACCCGCGTCGCTGAGCTGAACGGCATCAGCACTGATGACGT CAGTAAAAAATTCACCGTCGAGCCGTCCGTCACGCAAACGCTGATGAACAAAGTGCAGGAGTCATCCGCGTTTCTGCAGA CGATTAATATTCTGCCGGTCGCAGAAATGAAGGGTGAGAAAATCGGCGTCAGTGTGACCGGTACTATCGCCAGCACGACT GATACCTCGGGCGATGATGAGCGTAAGACCGCAGACTTCACCGCGCTTGAATCCAACAAGTACGAGTGCGACCAGATTAA CTTTGACTTCCACCTGAAATATAAAACCCTCGACCTGTGGGCGCGTTTTCAGGACTTCCAGCGCCGCATCCGCGACGCCA TTGTCAAGCGTCAGGCGCTCGATTTCATCATGGCCGGTTTTAACGGTACCACCCGCGCCGCCACCTCTGACCGTACCAAA AATCCGATGCTGCAGGATGTGGCCGTCGGCTGGCTGCAGAAATACCGCAATGAAGCCCCGACGCGTGTGATGAGCAATAT CACCGATGCTGACGGTAAGGTCGTTTCGGCAGTGATTCGCGTCGGTCGAAACGGCGACTATGAGAACCTCGACGCGCTGG TGATGGATGCGACCAATAACCTGATTGACGAGGTTTATCAGGATGACCCGAAACTCGTTGCCATCGTTGGCCGTAAGCTG CTGGCCGACAAATATTTCCCGCTGGTGAACAAGCCGCAGGAAAACAGCGAGGCGCTCGCGGCAGATATCATCATCAGCCA GAAGCGAATCGGCAACCTGCCTGCTGTGCGTGTGCCGTACTTCCCGGCGAATGCCGTGTTAGTGACCACGCTGGAAAACC TCTCTATCTATTTCATGGATGAGAGCCACCGCCGCAGCATTGATGAAAACCCGAAAAAAGACCGTGTGGAAAACTACGAG TCGATGAATATCGACTATGTGGTCGAGGCGTATGCCGCCGGGTGCCTGCTGGAAAACATCACCCTGGGCGATTTCACCGC ACCTGCAGCACCGGAAAGCGGAGCCTAA Protein sequence : MRPETRFKFNAYLTRVAELNGISTDDVSKKFTVEPSVTQTLMNKVQESSAFLQTINILPVAEMKGEKIGVSVTGTIASTT DTSGDDERKTADFTALESNKYECDQINFDFHLKYKTLDLWARFQDFQRRIRDAIVKRQALDFIMAGFNGTTRAATSDRTK NPMLQDVAVGWLQKYRNEAPTRVMSNITDADGKVVSAVIRVGRNGDYENLDALVMDATNNLIDEVYQDDPKLVAIVGRKL LADKYFPLVNKPQENSEALAADIIISQKRIGNLPAVRVPYFPANAVLVTTLENLSIYFMDESHRRSIDENPKKDRVENYE SMNIDYVVEAYAAGCLLENITLGDFTAPAAPESGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4625 | NP_458707.1 | putative major capsid protein | Not tested | SPI-7 | Protein | 9e-100 | 60 |
| t4319 | NP_807914.1 | major capsid protein | Not tested | SPI-7 | Protein | 9e-100 | 60 |
| unnamed | ABR13466.1 | predicted major capsid protein | Not tested | PAGI-6 | Protein | 2e-84 | 53 |
