Gene Information

Name : CFSAN001992_20140 (CFSAN001992_20140)
Accession : YP_007473740.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Unknown
Product : baseplate assembly protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4163460 - 4164368 bp
Length : 909 bp
Strand : -
Note : COG3948 Phage-related baseplate assembly protein

DNA sequence :
ATGGCAACTGTTGACCTGAGTCTGCTACCTGTTCCTGATGTGGTCGAGGAACTGGACTATGAAACTATCCTTGCGGAGCG
CATTGCAACGCTGATTTCGCTCTATCCGGAAGACCAGCAGGAAGCCGTCGCCCGGACGCTCGCACTTGAGTCTGAGCCAA
TTGTTAAATTGCTGCAGGAAAACGCCTACCGTGAGGTTATCTGGCGCCAGCGTGTCAATGAAGCTGCACGCGCAGTGATG
CTGGCTTATGCCATAGACAGTGACCTCGATAATATCGGGGCGAATTTCAATGTTGAGCGCCTTGTCGTCACGCCTGCTGA
TGACACCACCATTCCACCCACCCCGGCAGAAATGGAACTCGACGCCGATTATCGTCTGCGTATACAGCAGGCTTTTGAAG
GAATGAGCGTGGCGGGCTCTACGGGTGCCTATGAATTTCATGGCCGTAGTGCTGACGGGCGTGTCGCTGATATTTCTGTT
ATCAGCCCTTCCCCCGCGTGCGTCACGATATCTGTGCTCTCGCGTGAGAATAACGGCGCGGCGTCTGATGAGCTACTGAG
CATTGTGCGCAATGCACTTAATGGTGAGGACGTGAGGCCGGTTGCTGACCGTGTAACGGTGCAGTCAGCTCAGATTGTTG
ATTACCAGATACGCGCAACGCTTTTCATTTATCCGGGGCCGGAAAGTGAGCCGATTCGCGCAGCGGCTGAGGCGAAGCTC
AAAGCTTATGCCAGCGCTCAACACCGGTTAGGGCGGGATATTCGCCTGTCGGCCATCTATGCCGCGTTACATGTTGAGGG
GGTGCAGCGTGTCGAGCTGGCAGCGCCAGTGGCTGACATTGTGCTTGATAAAACGCAGGCCTCCTTTTGCACTGACTATC
AGATAGTGATTGGTGGCTCTGATGAGTGA

Protein sequence :
MATVDLSLLPVPDVVEELDYETILAERIATLISLYPEDQQEAVARTLALESEPIVKLLQENAYREVIWRQRVNEAARAVM
LAYAIDSDLDNIGANFNVERLVVTPADDTTIPPTPAEMELDADYRLRIQQAFEGMSVAGSTGAYEFHGRSADGRVADISV
ISPSPACVTISVLSRENNGAASDELLSIVRNALNGEDVRPVADRVTVQSAQIVDYQIRATLFIYPGPESEPIRAAAEAKL
KAYASAQHRLGRDIRLSAIYAALHVEGVQRVELAAPVADIVLDKTQASFCTDYQIVIGGSDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4613 NP_458695.1 probable phage baseplate assembly protein Not tested SPI-7 Protein 7e-76 63
t4307 NP_807903.1 phage baseplate assembly protein Not tested SPI-7 Protein 7e-76 63
unnamed ABR13480.1 predicted baseplate or tail fiber base Not tested PAGI-6 Protein 1e-48 54