Gene Information

Name : CFSAN001992_20130 (CFSAN001992_20130)
Accession : YP_007473738.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Unknown
Product : bacteriophage tail fiber protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4161287 - 4162927 bp
Length : 1641 bp
Strand : -
Note : COG5301 Phage-related tail fibre protein

DNA sequence :
ATGAGCACAAAATTTAAAACAATTATTACCACTGCCGGAGCTGCAAAACTGGCAGCGGCTACCTTGCCGGGTGGTAAAAA
AGTAAATATTACTGTGATGGCCGTAGGTGACGGCGGCGGTTCGCTGCCTGAGCCAAATGCCAGTCAGACAAAACTCATTA
ATGAGGTCTGGCGTCATGCGCTGAATAAAATTAGCCAGGACAACAGGAACAGCAATTACATTGTAGCCGAGCTGGTTATC
CCACCGGAGGTGGGCGGTTTCTGGATGCGTGAGCTCGGTCTTTATGACAATGAGGGTATCCTGATTGCTGTCGCCAATAT
GGCCGAAAGCTACAAGCCAGAACTGGCCGAGGGCTCAGGACGTGCGCAGACATGCCGCATGGTCATCATTGTCAGCAATA
TCGCCTCGGTGGAGCTATCCATTGATTCGACAATGGTGATGGCGACACAGGATTATGTCGACGACAAACTCGCCGAACAT
GAAAGATCACGTCGCCATCCTGATGCTACTCTGAGTGAAAAAGGCTTTACTAAACTCAGCAGTGCAACAGACAGCGCGTC
TGAGGAACTTGCAGCGACACCGAAAGCCGTCAAGGCCGCATACGACCTTGCTAACGCGAAATATACAGCTCAGGATGCCA
CCACAACGCGAAAAGGCCTTGTGCAACTCAGCAATGCCACTGACAGTATGTCTGAAACACTTGCCGCGACACCGAAAGCA
GTCAAGGTGGCATATGACCTTGCTAACGCGAAATATACAGCTCAGGACGCCACTACGGCGCGTAAAGGGATTATCCAGCT
CAGCAATGCTACTGACAGTACGTCTGAGACGCTGGCCGCAACGCCGAAAGCGGTTAAAGCGGCTATGGATAATGCGAACG
GGCGCCTGGAAAAAAACAGCAATGGCGGCGATATTCCGGACAAGGCGAAGTTTGTAGAAAACCTCGGTTTAAAAGAAACC
CTGAACCCGACAAAACGCGTGAGTATCGGCAATATCGGAACCGGCGTTTTTGACGGCAGCACACCGTGTATAAATATCGG
TGACAGTGACAGTGGATTTATCGGCAGCGCGGATGGCGTACTGGATATTTACTGTAACGGTGCCAAAGTGGGTTATATCA
ATGGTAACGGATTACACATGCTCACTGATATTCATTTCGATAATGCGCGCATGACCACTAATGGGGACATTTTTAGTTCA
GTGTGGGGGAATAACTGGCTGAGTATCTGGATTACTAATCAGCTAAATACCCGTGGAACGATTGACTGGATCAATAGTGA
ACTGGCAATTCGTGACAACAACATCAACACCCGCGCCACCATTGATTATGTTAACCAGACTTTCGCCCGTAAAAATACCG
GCAGCATTCAGGACTGGGGCTGGATTCGGGACGACAGCACCGGATTTATAATGCAGTGGGGAACACTTGGTAACTCAAAC
GGAACCTACAATTTTCCGCGCGCTTTCCCTGTTGGTTGCTTTGCCGTTTTTGTAACCAATGCCAGTGCTCAGGGCAACCA
GGTGGATAACGCATTCGGATACCCGGTGAGCAACAGTCAGTTTTTTGCCGCCACCAAGTCATCAGCAATAGCCAATCTGG
TCAATAATTTTCCTGTATCCTGGCTTGCACTTGGGAGATAA

Protein sequence :
MSTKFKTIITTAGAAKLAAATLPGGKKVNITVMAVGDGGGSLPEPNASQTKLINEVWRHALNKISQDNRNSNYIVAELVI
PPEVGGFWMRELGLYDNEGILIAVANMAESYKPELAEGSGRAQTCRMVIIVSNIASVELSIDSTMVMATQDYVDDKLAEH
ERSRRHPDATLSEKGFTKLSSATDSASEELAATPKAVKAAYDLANAKYTAQDATTTRKGLVQLSNATDSMSETLAATPKA
VKVAYDLANAKYTAQDATTARKGIIQLSNATDSTSETLAATPKAVKAAMDNANGRLEKNSNGGDIPDKAKFVENLGLKET
LNPTKRVSIGNIGTGVFDGSTPCINIGDSDSGFIGSADGVLDIYCNGAKVGYINGNGLHMLTDIHFDNARMTTNGDIFSS
VWGNNWLSIWITNQLNTRGTIDWINSELAIRDNNINTRATIDYVNQTFARKNTGSIQDWGWIRDDSTGFIMQWGTLGNSN
GTYNFPRAFPVGCFAVFVTNASAQGNQVDNAFGYPVSNSQFFAATKSSAIANLVNNFPVSWLALGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4611 NP_458693.1 probable phage tail fibre protein Not tested SPI-7 Protein 8e-144 63
t4305 NP_807901.1 phage tail fiber protein Not tested SPI-7 Protein 8e-144 63